KEGG   Bifidobacterium breve S27: BS27_0637
Entry
BS27_0637         CDS       T03123                                 
Symbol
dnaQ
Name
(GenBank) DNA polymerase III alpha subunit
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
bbrs  Bifidobacterium breve S27
Pathway
bbrs03030  DNA replication
bbrs03430  Mismatch repair
bbrs03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bbrs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BS27_0637 (dnaQ)
   03430 Mismatch repair
    BS27_0637 (dnaQ)
   03440 Homologous recombination
    BS27_0637 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bbrs03032]
    BS27_0637 (dnaQ)
   03400 DNA repair and recombination proteins [BR:bbrs03400]
    BS27_0637 (dnaQ)
Enzymes [BR:bbrs01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BS27_0637 (dnaQ)
DNA replication proteins [BR:bbrs03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BS27_0637 (dnaQ)
DNA repair and recombination proteins [BR:bbrs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BS27_0637 (dnaQ)
SSDB
Motif
Pfam: RNase_T Rv2179c-like DEDDh_C DNA_pol_A_exo1 RNase_H_2
Other DBs
NCBI-ProteinID: AHJ24490
Position
complement(792242..792949)
AA seq 235 aa
MTVPGITVFGQQSHPDWTAGTPIAEDATGFPTDYVALDLETTGFYPNRCAITEIGAVRVR
GGRVVDQFQQLINPLCPIPRQITALTGITDAMVADHDPIDGVLPQFISWLADSNAAAETE
PIVGHNVSFDLRFLDYNTRHIAGCGFACADYDTMQISRALFPKQSHHRLADLIVRFGIAD
NEEHRALSDAIQTQQCFEWMRHYVSEHHESSTIRWKQAPAKNSTEILHQQLVVQR
NT seq 708 nt   +upstreamnt  +downstreamnt
gtgaccgttcccggcattaccgtttttggccagcagtcccatcccgactggaccgccggc
accccgattgccgaagacgccaccggattccccaccgattatgtggcgcttgatttggag
accaccgggttttatccgaaccgttgcgccatcaccgaaataggtgccgtacgcgtgcgc
ggcggccgtgtcgttgaccagttccagcaactcatcaacccgctatgcccgattcctcgt
caaatcaccgcgttgaccggcattaccgacgcgatggtcgccgaccatgatcccattgac
ggggtgctcccccaattcatttcctggctcgccgattccaacgccgcggctgagaccgag
cccatcgtcggtcataatgtcagcttcgatctgcgattcctggactataacacccgccat
attgcgggatgcggattcgcctgcgccgactatgacaccatgcaaatcagccgtgccctg
ttccccaagcagagccatcaccggctcgccgacctgattgtacgattcggcattgccgat
aacgaggaacaccgcgcattaagcgatgccatccaaacccagcagtgcttcgaatggatg
cggcattatgtcagcgagcaccatgaatccagcacgatccgatggaagcaggcaccagcc
aagaacagcaccgaaattctgcaccagcagttggtggtacagcggtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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