KEGG   Bifidobacterium breve ACS-071-V-Sch8b: HMPREF9228_1834
Entry
HMPREF9228_1834   CDS       T01844                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
bbv  Bifidobacterium breve ACS-071-V-Sch8b
Pathway
bbv00300  Lysine biosynthesis
bbv00470  D-Amino acid metabolism
bbv01100  Metabolic pathways
bbv01110  Biosynthesis of secondary metabolites
bbv01120  Microbial metabolism in diverse environments
bbv01230  Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:bbv00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    HMPREF9228_1834 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    HMPREF9228_1834 (lysA)
Enzymes [BR:bbv01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     HMPREF9228_1834 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: AEF26603
Position
complement(2081621..2083243)
AA seq 540 aa
MPISPIWPAATAVDANGAIAFHGRTAESLLDEFGSPLYLIDTDEVSARAKHFVRAAAEAF
NTSTTHVSFAGKAFLSKEIVRLVAEAGMFVDTCTMGEMRIALAAGVPGRRLVLHGNNKSD
DEIALAIEQGFAKIVVDEPNEPERIAAIARKLGKRARVMLRVTVGVHAGGHEYISTAHED
QKFGVPLLAAGADAAVLDVLNNLTDVTPAATNARIAESDVNAGNDHPQSTTPIVPASGSG
KPARELRYDVKYPYDLSHEEVSDTDKVLAAAMEAIADGPSIAVLKTILANQDVLELVGAH
SHIGSNIHDADAFIHAAKRMMLLRKTLWATDAYILPEIDLGGGYSVAYTDGEDSMDIDVE
LTRLAGSVSDTNRALGMPAPAISFEPGRYIVAPAGVTLYRVGTIKHVHLSDAKDSAGNPI
GERVYVSVDGGMSDNIRPALYGADYTAHLANRTGSTETMLARVCGMHCESGDIVVHEVRL
PADLKRGDILAVPVTGAYGRTMASNYNQALIPAVVAVSEQGAHVMLRRQTIDDLLDLDQG
NT seq 1623 nt   +upstreamnt  +downstreamnt
atgcctatttctccaatttggccggccgccacggccgtggatgccaatggtgccattgca
tttcatggccgcaccgccgaatccctgttggacgagtttggctcgccgctttacctcatc
gataccgatgaggtatcggcccgtgccaagcacttcgtacgcgctgcagccgaggcattc
aacacctccaccacgcacgtgagctttgccggcaaggcgttcctgtccaaggaaatcgtg
cgactggtcgccgaggctggcatgtttgtggacacctgcacgatgggggagatgcgaatc
gccctcgctgccggtgtgcccggccgccgcctagtgctgcatggcaacaacaagtccgat
gatgaaatcgcgctggccatcgaacagggcttcgccaaaatcgtggtcgatgagcctaat
gagccggagcgcatcgccgccatcgcccgtaaactcggcaagcgtgcccgcgtgatgctg
cgtgtcactgtcggcgtgcatgccggtggtcacgaatacatctccaccgctcacgaggat
cagaagttcggcgtcccgctgctggcggccggagccgacgccgcagtgctcgacgtgctg
aacaacctgacggacgtgacacctgccgcgaccaacgcgcgtattgcggagtcggacgtt
aatgctggcaatgaccaccctcagtcgactacgccgatagttcccgccagcgggagcggc
aaaccggcacgcgaactgcgttatgacgtcaagtatccgtacgacctgagccatgaggaa
gtctccgatacggataaggtacttgccgccgctatggaagccatcgcagacggtccgtcc
attgccgtgctcaagaccatcctggccaatcaggatgtgctggaactggtcggtgctcac
tcgcatatcggctccaacatccacgacgcggatgccttcatccacgccgccaagcgcatg
atgctgctgcgcaagaccctgtgggccaccgacgcctacatcctgcccgaaatcgatctc
ggcggtggttactccgtggcctacaccgacggcgaagattccatggacatcgatgtggag
ctcactcgtctggccggctcggtcagcgacacaaaccgtgctctgggcatgcccgccccg
gccatcagcttcgagcccggccgttacatcgtggctccagccggcgtgaccctgtatcgt
gtaggcaccatcaagcatgtgcacctgagcgatgccaaagacagtgccggcaacccgatt
ggcgagcgtgtgtatgtgtctgtggatggcggcatgtccgacaatatccgtccggcactg
tacggagccgattacaccgcacatttggccaaccgaaccggctctactgagacgatgctt
gcccgcgtgtgcggcatgcattgcgaatccggcgacatcgtggtccatgaggtgcgtttg
cctgctgatctcaagcgcggagacattcttgccgtgccggtcaccggtgcatacggccgc
acgatggccagcaactataaccaagcgttgattccagctgtggtcgccgtgtctgagcag
ggcgcgcatgttatgttgcgccgccagaccatcgatgacctgctggacttggatcaaggc
tga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (24)   

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