KEGG   Bacteroides caccae: CGC64_17535
Entry
CGC64_17535       CDS       T05064                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
bcac  Bacteroides caccae
Pathway
bcac03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bcac00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CGC64_17535
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bcac03019]
    CGC64_17535
Enzymes [BR:bcac01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     CGC64_17535
Messenger RNA biogenesis [BR:bcac03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     CGC64_17535
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 P-loop_SecA ERCC3_RAD25_C UTP25 CMS1
Other DBs
NCBI-ProteinID: ASM67498
UniProt: A0A174THB5
Position
complement(4289112..4290239)
AA seq 375 aa
MTFKELNITEPILKAIKEKGYTVPTPIQEKAIPAALAKRDILGCAQTGTGKTASFAIPII
QHLQVVSKESVKRQGIKALILTPTRELALQISECIDDYSKYTRVRHGVIFGGVNQRPQVD
MLRKGIDILVATPGRLLDLMNQGHIHLDTIQYFVLDEADRMLDMGFIHDIKRILPKLPKE
KQTLFFSATMPDTIVTLTKSLLKNPVKIYITPKSSTVDSINQVVYFVEKKEKSQLLISIL
QKAEDQSVLIFSRTKHNADKIVKILGKAGIGSQAIHGNKSQAARQSALGNFKSGKTRVMV
ATDIASRGIDISELPMVINYDLPDVPETYVHRIGRTGRAGNTGTALTFCSQEERKLVNDI
QKLTGKKLNKANFTF
NT seq 1128 nt   +upstreamnt  +downstreamnt
atgacatttaaagaattaaatataaccgagccgattttaaaagcaatcaaagaaaaagga
tatacagtaccgaccccaattcaagaaaaagcgattcctgccgcattggcaaaaagagat
atattaggttgtgcgcagactggtacaggaaagacggcttcatttgccattcctatcata
caacatttgcaagtcgtgagcaaggaatctgtcaagcgtcagggtatcaaagccttgata
ttgacacctacccgtgaacttgccctgcaaatcagtgaatgcattgacgattattcaaaa
tatacccgtgttcgccacggagtgatcttcggtggtgtaaatcaacgtccgcaggttgat
atgttacgcaagggaattgatattctggtagctactccgggacgtctacttgatttgatg
aatcagggacatatacatctggatactattcagtattttgtattggatgaggctgaccgt
atgcttgacatgggatttatccatgatattaagcgaatattgccgaaacttccgaaagaa
aagcaaaccttgttcttctcggcaacaatgcctgacaccattgttactttaaccaaatct
ctgttgaagaatccggtgaagatttacataacaccgaaatcgtctactgtggactctatc
aatcaggttgtgtacttcgtagagaagaaagagaaaagtcaattattaatttcaattttg
caaaaagcagaagaccaatcggtacttatcttctcgcgtacgaagcataatgccgataag
attgttaagatattaggtaaggctgggatcggtagtcaggctatacacggaaataagagt
caggcggcaagacagtccgcattgggtaattttaagtcggggaaaacccgggttatggtt
gctactgatattgcttccagaggaatcgatataagtgagttgcctatggttattaattat
gatctcccggatgttcccgagacgtatgtacatcgtatcggtcgtacaggaagagcagga
aatacagggacagcacttacattctgttcgcaggaagaacgtaaactggttaatgatatt
cagaagttgaccggtaagaaactcaataaggctaatttcactttttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system