KEGG   Paraburkholderia caribensis: K788_0001587
Entry
K788_0001587      CDS       T04141                                 
Name
(GenBank) Sarcosine oxidase alpha subunit
  KO
K00302  sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1]
Organism
bcai  Paraburkholderia caribensis
Pathway
bcai00260  Glycine, serine and threonine metabolism
bcai01100  Metabolic pathways
Module
bcai_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:bcai00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    K788_0001587
Enzymes [BR:bcai01000]
 1. Oxidoreductases
  1.5  Acting on the CH-NH group of donors
   1.5.3  With oxygen as acceptor
    1.5.3.1  sarcosine oxidase (formaldehyde-forming)
     K788_0001587
    1.5.3.24  sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
     K788_0001587
SSDB
Motif
Pfam: GCV_T SO_alpha_A3 GCV_T_C Fer2_4 Pyr_redox_2 FAD_oxidored Pyr_redox_3 FAD_binding_2 NAD_binding_8 Thi4 HI0933_like FAD_binding_3 AlaDh_PNT_C GIDA Pyr_redox POPLD DAO 3HCDH_N Lycopene_cycl
Other DBs
NCBI-ProteinID: ALL70057
UniProt: A0A0P0RMD4
Position
unnamed:705508..708468
AA seq 986 aa
MRLTPHRGEWIERDTRVDFSYEGKQYSGLIGDTISSAMWASGLRVLGRSFKYHRPRGVLS
LANHDVNVMLQDGVRLNVRADVTALTPGGNWYSVNTFGGVEGDRARVVGKLAAFLPVGFY
YKAFYSKRWFPRWERMFRTMTGLGKVDFDAPHIRTPKRYGFCDVLVIGAGPSGLSAALAA
AGAGADVVIVDENARIGGSGGYQLGGDEQRFDTVHELETAVLGHPRIRVMTGTLAAAYYA
DLWVPLVNATCITKMRAKAVIVASGAFEQPAVFRNNDLPGVMLASAAQRLAYRYAVAPGK
RAVVLAANADGYRAALDMLARGIEVVAVVDLRASHANDDLERDLTAKGVEVLASSCVVEA
VADRSGERLTGVRVGAFSTSSGLRHSTATTRLIACDTLLMSVGWSPAANLLYQAGTKMHF
DHDVQQFVPEQLPPGVFACGRVNGVYTLGSKLRDGARAGVQAAAHSGNGKADEAAPLRLL
ERESPSHPWPIVGHTSGKNFVDFDEDLQLKDFENAVQEGFDNIELLKRFSTNGMGPSQGK
HSNMNGLRILARLTGKEPQEVGTTTARPFFHPVPMSHLAGRGFNPERRTPLHAQHQLLGA
VWMPAGVWQRPEYYAVAGKERAVCIEEEALAVRNGVGIIDVGTLGKIEVRGPQAAEFLER
VYVSKYAGLKPGMTRYAVMCDESGVVIDDGVIARLADDHFYFTTTTSGAAAIYRELSRLN
TIWRLDCGIVNVTGAFAAVNLAGPASRAVLGKLADLDLSPAAFPYLGVRVTGIALGQNRV
PARLMRVGFVGEWGYEIHIPAEYGAALWRTLLEAGHEHGIRPFGVEAQRLLRLEKGHVIV
SQDTDGLTTPRDAGMEWAVKMDKPFFVGKRSLQIIDKLPAKQRLVGFALDAGVRDAGLRE
CHLVIERGEIAGRVTSVAWSATLQKTIGLAFVRPDQAEPGTRISFRASGGRMVPATVVPT
PFYDPESERQKDAVTTKAAAPKKETA
NT seq 2961 nt   +upstreamnt  +downstreamnt
atgcgtctgactcctcaccgcggcgaatggatcgagcgcgatacacgcgtcgacttctcg
tacgaaggcaaacaatacagcggcctcatcggcgacacgatctcgagcgcaatgtgggcc
tcgggcctgcgcgtgctcggccgcagcttcaagtatcaccgcccgcgtggcgtcctttcg
ctcgccaatcacgatgtcaacgtgatgctgcaagacggtgtgcggctgaacgtgcgcgcc
gatgtgacggcattgacgccgggcggcaactggtattcggtgaatacgttcggcggcgtg
gaaggcgatcgtgcgcgcgtcgtcggcaagctcgcggcgtttctgcccgtgggcttctac
tacaaggcgttttatagcaagcgctggttcccgcgctgggagcgcatgttccgcaccatg
acgggtctcggtaaggtcgatttcgacgcgccgcatatccgcacaccgaagcgctacgga
ttttgcgacgtgctggtgatcggggccggcccatccgggttgtcggcggcactcgcggcg
gccggggccggcgccgacgtcgtgatcgtcgatgagaacgcgcgcattggcggcagcggc
ggctatcagctgggcggcgacgagcagcgtttcgacacggttcatgaactggagaccgcc
gtgctcggtcatccgcgcatccgcgtgatgacgggcacgctcgcagcagcctattacgcg
gacctgtgggtgccgctcgtgaacgcgacctgtatcacgaagatgcgcgcgaaagctgtg
atcgtcgcgagcggtgcgttcgagcaacccgccgtgtttcgcaacaacgacctgccgggc
gtgatgctggcgtcggcggcgcaacgccttgcctatcgttatgccgttgcgcccggcaag
cgggccgtcgtgctcgccgccaatgccgacggctaccgcgcggcgctcgacatgctggcg
cgcggtatcgaagtggttgccgtggtggatctgcgcgcatcgcatgccaacgatgacctc
gagcgcgatctcacggcgaagggcgtcgaagtactggcatcgagttgtgtggtcgaggcg
gtggcggaccgctcgggcgaacggctgacgggcgtgcgcgtcggcgcgttttcgaccagc
agcggcttgcgccattcgacggcaacgacccgtctgatcgcatgcgacacgctgctgatg
agcgtcggctggtcgcctgccgcgaacctgctgtatcaggcgggcacgaagatgcacttc
gatcacgatgtgcagcagttcgtgccggagcaattgccgcccggtgtgttcgcgtgcggc
cgcgtgaacggcgtgtacacgctcggcagcaagctgcgcgacggcgcgcgcgcaggcgtg
caggcagcagcgcacagcggcaacggcaaggcagacgaagccgcgccactgcgtcttctg
gaacgggaatcgccatcgcatccctggccgatcgtgggtcacacgtccggcaagaacttc
gtcgatttcgacgaagacctgcaactgaaggacttcgaaaacgccgtgcaggaaggcttc
gacaacatcgaattgctgaagcgcttctcgaccaatggcatggggccgagccagggcaag
cattcgaacatgaacgggctgcgcatcctcgcgcgtctgacgggcaaggagccccaggag
gtcggcacgacgacggcgcggccgttcttccatcccgtgccgatgtcgcatctcgccggg
cgcggcttcaacccggaacggcgcacgccgctgcacgcgcagcatcagttgctcggcgca
gtgtggatgccggcgggcgtctggcagcgcccggagtactacgcggtcgcgggcaaggag
cgcgcggtctgcatcgaggaagaggcgctcgccgtgcgcaacggcgtgggcatcatcgac
gtggggacgctcggcaagatcgaagtgcgcgggccgcaggccgccgagttcctcgaacgc
gtgtacgtgtcgaagtacgcgggcttaaagcctggcatgacgcgctacgccgtgatgtgc
gacgaatccggcgtggtgatcgacgacggcgtgatcgcgcgtctcgccgacgatcacttc
tacttcaccaccacgacgtcgggcgcggcggccatctatcgcgagctgtcgcggctcaac
acgatctggcggctcgactgcggcatcgtcaacgtgacgggcgcgttcgcagcggtgaat
ctcgcggggcccgcatcgcgcgccgtgctcggcaaactcgccgatctcgacctgtcgccg
gcggcctttccgtacctcggcgtgcgcgtgacgggcattgccctcggtcagaaccgcgtg
cctgcgcgtctgatgcgggtgggtttcgtcggcgaatggggatatgaaatccatattccc
gccgagtacggcgcggcgctgtggcgcacgctgctcgaagcgggacatgaacacggcatc
cgtccgttcggcgtcgaagcgcagcgtctgctgcggctcgagaaggggcacgtgatcgtg
agccaggacaccgacggtctgaccacaccgcgcgacgcgggcatggaatgggccgtgaag
atggacaagccgttcttcgtcggcaaacgcagcctgcagatcatcgacaagctgcctgcc
aaacagcggctggtcggcttcgcactcgatgcgggcgtgcgcgacgcgggtctgcgcgag
tgtcatctcgtgatcgaacgcggcgagatagcgggacgtgtgacgagcgtggcgtggagc
gcgacgctgcaaaaaacgattggccttgcattcgtgcggcccgaccaggccgagcccggc
acgcgcatcagcttccgcgcgagcggcggccggatggtgcccgccacggtggtgccgaca
ccgttctacgaccctgagagcgagcgtcaaaaagacgccgtaacaacaaaggccgccgcg
ccgaagaaggagacagcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (19)   
   Pfam (19)   
All databases (41)   

Download RDF
DBGET integrated database retrieval system