KEGG   Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043: BBCT_0738
Entry
BBCT_0738         CDS       T03931                                 
Name
(GenBank) ATP-dependent DNA helicase PcrA
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
bcat  Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043
Pathway
bcat03420  Nucleotide excision repair
bcat03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bcat00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BBCT_0738
   03430 Mismatch repair
    BBCT_0738
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bcat03400]
    BBCT_0738
Enzymes [BR:bcat01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BBCT_0738
DNA repair and recombination proteins [BR:bcat03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BBCT_0738
   MMR (mismatch excision repair)
    Other MMR factors
     BBCT_0738
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PcrA_UvrD_tudor UvrD_C_2 AAA_30 DUF2474 AAA_22 ResIII
Other DBs
NCBI-ProteinID: BAR01706
UniProt: B6XV75
Position
905122..907845
AA seq 907 aa
MNFAVIDFESSWKEEPVEQNMGPSLCDPQSLIKDLNPQQMEAVKYYGQALLIGAGAGSGK
TRVLTRRIAWLLAHGFWASSILAITFTNKAAAEMRERLAALVGPEAEHMWISTFHSACVR
ILRRDGKEIGLTSGFSIYDTADCERLVKLISGDLNIDTKRYTPRMLLGKISDCKNSLTSW
QDQLKSVNCDYKPGQRGYQVSAGDVDELVAVVYAEYQHRLAMANAVDFDDLIMRTVELFQ
RCPQVSEYYRHKFRYVFVDEYQDTNHAQYVLVRELSGIDSGEQPDPQMRGAGRVGPSWIT
VVGDSDQSIYAFRGADIRNIQDFEQDFPNAKTIMLEQNYRSTQTILDAANAVIARNENRK
PKKLWTALGEGDKIVGYAADNAQQEAGWIANEIARIHEEEGIAYRDIAIMYRANAQSRSL
EEAMINANLPYQLVGGTKFYERKEIKDALAYLQAIVNPADNVNVRRILNVPKRGLGVRAE
GLIASYADAHDTTFFGAIEHMEQIEGMSARTTKPLGVFRDMMHGLADFAKDHDTKPSEVV
AEVLSKSGILEELQRSEDPQDASRVDNLSQLQSVAAEFEQNTPDATLAGFLETTALVADS
DQLPGENEDSGKVTMMTLHTAKGLEYPYVFLTGMEQGTFPHQRAMEDTSELAEERRLAYV
GITRAKRRLYVTRAAVRAQWGQANDMMHSQFLDEIPDELIDWKRREAGVERMRASWRNDD
DEFGGWDDDDDFGSVPFGGSSYGKSSYGGSSYGSGTYGSRSSYGSSSYGSGRAQYGGSSA
RGASSLYGSSSQRSYVGAGSSSSYGSLYGSYGSGKSSGKSGKVTTRRVKPKSKPVDLTKS
SQASQTDNRSGLSISDVHVGDRLTHDHFGMGTVIEIQDKGANSVITVDFGNGEVKRLLLR
MAPIEML
NT seq 2724 nt   +upstreamnt  +downstreamnt
atgaatttcgcagtaatcgacttcgaatcttcatggaaagaggaaccggtggagcagaat
atggggccaagtctgtgcgatccgcaaagtctgatcaaggacctcaatccgcaacagatg
gaagcggtgaagtactacggtcaggccctgcttatcggagcaggcgccggatccggtaag
acccgcgtgctcaccagacgcatcgcatggctgctggcacacggtttttgggcgagcagc
attctcgccatcaccttcacgaacaaggccgcagcggaaatgcgtgaacgtcttgctgcc
ctcgtagggcctgaagccgaacatatgtggatctccaccttccattccgcgtgcgtgcgt
atcctccgacgagacggcaaggaaatcggccttacctcaggattctccatttatgacacg
gctgattgcgaacgtttggtcaagctcatcagcggcgatttgaacatcgatacgaagcgg
tatacgccgcgcatgctgctcggcaaaatctccgactgcaagaattcattgacttcatgg
caggaccagttgaaaagcgtgaactgcgactacaagccaggccagcgcggatatcaggtt
tcagccggcgacgtcgatgagctggtcgccgtggtgtatgcggagtaccagcaccgtctg
gccatggcgaacgccgtggattttgacgacctgatcatgcgcaccgtcgaattgttccag
cgttgcccacaggtgagcgaatactaccggcacaagttccgttatgttttcgtggacgag
tatcaggacaccaatcatgcgcaatatgtgctcgtacgtgagctttccggcattgattca
ggagaacagcccgatccgcagatgcgaggagcgggccgtgtcggaccgtcttggattacg
gtggtaggtgattccgaccagtcgatttatgcgttccgaggcgcggatattcgtaacatt
caggattttgagcaggatttccctaatgcgaaaaccatcatgctcgagcagaattatcgt
tcgacgcagaccattctcgacgcagccaatgcggtgattgcaagaaatgaaaatcgcaag
ccgaaaaaattgtggacagcacttggcgaaggcgacaaaatcgtcggatacgcggccgac
aacgcacaacaggaagcagggtggatagccaacgaaatcgcgcgaatccacgaagaggaa
ggcatcgcataccgcgacatcgccatcatgtaccgtgccaacgcgcaatcacgttcgctt
gaagaggccatgatcaacgccaatcttccatatcagctggtcggtggcaccaaattctac
gagcgcaaggaaatcaaggatgcgctcgcatatctgcaggccatcgtgaatcccgcggac
aatgtgaacgtccgccgcatcctcaacgtgccgaagcgtggattgggcgttcgtgccgaa
ggcctcattgcctcgtatgcggatgctcacgacactacgttttttggtgcgattgaacat
atggagcagattgaaggcatgtccgcgcgtacgacgaagccgttgggcgtattccgcgac
atgatgcatgggcttgcggatttcgcgaaggaccatgatacgaaaccatccgaagtggtt
gccgaagtgctctccaagagtgggattttggaggagttgcagcgctccgaggacccgcag
gacgcttcccgcgtcgacaatctttcccaactgcagtcggtggctgcggaattcgagcag
aacacgcctgatgccacattggcgggattcttggaaaccacggctttggtggccgattcc
gaccagttgccgggggagaacgaggactccggcaaagtaacgatgatgaccctgcatacg
gctaagggtctggaatatccatacgtattcctgaccggcatggagcagggaacattcccg
caccagcgggccatggaggataccagtgagcttgccgaggagcgtcgccttgcctatgtg
ggcatcacccgcgcgaagcgtcgcctgtatgtgacgcgtgcggccgtgcgcgcgcaatgg
gggcaagccaacgatatgatgcacagccagttccttgacgagattcccgacgagctgatc
gattggaaaagacgtgaggccggagtcgaacgcatgcgtgccagctggcggaatgatgac
gacgagttcggcggctgggatgatgacgacgatttcggatcagtgccgttcggtggctcc
tcatatggaaagtcgagttatggtggttcctcatatggttccggtacgtatggatcgcgg
tcctcgtacgggtcgtcctcgtatgggtcgggtcgcgcgcaatacggtggttcgtccgcg
cgcggcgcatcatccttgtacggctccagctcgcaacgttcgtatgtaggagcgggatcg
agctcctcatatggttctttatacggttcgtacggctccggcaagtccagcggaaaatcc
ggcaaggtcactactagacgagtcaagccgaaaagcaaacctgtggacctgaccaaatcc
tcgcaggcaagccaaaccgacaatcggagcggcttgagcatctcggacgtgcatgtcgga
gacaggctcacgcatgaccatttcggcatgggcacggtcatcgaaatacaggacaaaggc
gcgaattcggtcattaccgttgatttcggcaatggtgaggtcaaacgtctgctgctgcgt
atggcacccatcgaaatgctgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

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