KEGG   Burkholderia cepacia ATCC 25416: APZ15_11050
Entry
APZ15_11050       CDS       T04772                                 
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
bcep  Burkholderia cepacia ATCC 25416
Pathway
bcep03420  Nucleotide excision repair
bcep03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bcep00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    APZ15_11050
   03430 Mismatch repair
    APZ15_11050
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bcep03400]
    APZ15_11050
Enzymes [BR:bcep01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     APZ15_11050
DNA repair and recombination proteins [BR:bcep03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     APZ15_11050
   MMR (mismatch excision repair)
    Other MMR factors
     APZ15_11050
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PcrA_UvrD_tudor AAA_12 AAA_30 Viral_helicase1 AAA_11
Other DBs
NCBI-ProteinID: ALK18300
UniProt: A0A806UST7
Position
1:2437287..2439650
AA seq 787 aa
MPDLLANLNPEQLAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQQGYASPPTVLAVTF
TNKAAREMMARLSAMMPIDTRGMWIGTFHGLCNRMLRTHWRDAGLPQTFQILDTADQLSA
IKRLMKAANVDDEKYPPKNVQYFINNAKEQGLRPDKVDATDNFNRKFVELYQAYDQQCQR
EGVVDFPELLLRCYELLAYNAPLRAHYQARFRHILVDEFQDTNKLQYAWLKMLAGGQNAI
FAVGDDDQSIYAFRGANVGNMRDFEDEFRVRNLIKLEQNYRSHGNILDAANQLISNNAHR
LGKNLRTDAGHGEPVRVYEASTDSQEAGWIVEEIRSLINTGMARSEVAVLYRSNAQSRSI
EHTLMSSGIPYRVYGGLRFFERQEVKHALAYLRLIDNPNDDTAFVRVVNFPTRGIGARSI
EQLADAARLYGCSMAAAIPYVTGKAGTSLGGFANLVAKMRADTQQMNLPDTVEHIVRASG
LADFYQGEREGQDRLENLQELVNAATAFIAEEGYGLDTPARSIPLRAGAIAAPELGSAAD
DQAVDVLDPVSPADPAQNPDTMTPLAGFLSHASLEAGDNQAQAGQDAVQLMTVHAAKGLE
FSAVFITGLEEGLFPHENSVLESDGLEEERRLMYVAITRAKERLYLSFAQSRMLHGQTRY
NVRSRFFDELPEHVLKWLTPKVEVGSRWGGRSDNAGYGRDWFARPGGGSREQIVDAAVSA
PLPAFANKQRAADTGFRVGQQVFHTKFGEGTVTALEGNGTDAKAQVKFKRHGEKWLALAV
AKLQAVE
NT seq 2364 nt   +upstreamnt  +downstreamnt
atgcccgacctgctcgccaatctgaaccccgaacaactcgccgccgtcacgttgccgaac
gaaccggcgctgatcctcgcaggggcgggcagcggcaagacccgcgtgctgatcacgcgc
atcgcgtggctgatccagcagggctacgcatcgccgcccaccgtgctcgccgtgaccttc
acgaacaaggccgcgcgcgagatgatggcgcgcctgtcggcgatgatgccgatcgacacg
cgcgggatgtggatcggcacgttccacggcctgtgcaaccggatgctgcgcacgcactgg
cgcgacgccggcctgccgcagaccttccagatcctcgacacggccgaccagctgtccgcg
atcaagcggctgatgaaggcggcgaacgtcgacgacgagaagtacccgccgaagaacgtc
cagtacttcatcaacaatgcgaaggagcaggggctgcgtcccgacaaggtcgacgcgacc
gacaacttcaaccgcaagttcgtcgagctgtaccaggcatacgaccagcagtgccagcgc
gagggcgtcgtcgatttccccgagctgctgctgcgctgctatgaattgctcgcgtacaac
gcgccgctgcgcgcgcactaccaggcgcgcttccggcacatcctcgtcgacgagttccag
gacaccaacaagctgcagtacgcgtggctcaagatgctcgcgggcggccagaacgcgatc
ttcgcggtcggcgacgacgatcagtcgatctacgcgttccgcggcgcgaacgtcggcaac
atgcgcgacttcgaagacgaattccgggtgcgcaacctgatcaagctcgagcagaactac
cggtcgcacggcaacatcctcgacgcggcgaaccagctgatctcgaacaacgcgcaccgc
ctcggcaagaacctgcgtaccgacgccggccacggcgaacccgtgcgcgtgtacgaggcg
agtaccgattcgcaggaagccggctggatcgtcgaggagatccgctcgctgatcaacacc
gggatggcgcgcagcgaagtggccgtcctgtaccgcagcaacgcgcagtcgcgctcgatc
gagcacacgctgatgtcgtcgggcatcccgtaccgcgtgtacggcggcctgcgcttcttc
gaacgccaggaagtgaagcacgcgctcgcgtacctgcgcctgatcgacaacccgaacgac
gacaccgcgttcgtgcgcgtcgtgaacttcccgacccgcggaatcggcgcgcgctcgatc
gagcagctcgccgacgccgcgcgcctgtacggctgctcgatggccgccgcgattccgtac
gtgacggggaaggccggcacgagcctcggcgggttcgcgaacctggtcgcgaagatgcgc
gccgacacgcagcagatgaacctgcccgacaccgtcgagcacatcgtgcgcgccagcggt
ctcgccgatttctaccagggcgagcgcgaaggccaggaccgtctcgagaacttgcaggaa
ctcgtgaacgcggccaccgcgttcattgccgaggagggctacgggctcgacacgccggcc
cgttcgattccgctgcgcgcaggcgcgatcgcggccccggagctcggctctgcggcggac
gatcaggcggtcgacgtgctcgacccggtatcgcctgccgatccggcacagaaccccgat
acgatgacgccgctcgccggtttcctgtcgcatgcgtcgctggaggccggcgacaaccag
gcgcaggccggccaggacgccgtgcagctgatgacggtgcacgcggcgaaggggctcgaa
ttctcggccgtgttcatcacgggcctcgaggaagggctgttcccgcacgagaacagcgtg
ctcgaatcggacggcctcgaggaagagcgccggctgatgtacgtcgcgatcacgcgcgcg
aaggagcggctctacctgtcgttcgcgcagagccggatgctgcatggccagacgcgttac
aacgtgcgctcgcgcttcttcgacgagctgcccgaacacgtgctcaagtggctgacgccg
aaggtcgaggtcggttcacgctggggtggccggtcggacaacgccgggtacgggcgcgac
tggttcgcgcggccgggcggcggcagtcgcgagcagatcgtcgatgcggccgtgtccgcg
ccgctgccggcgttcgcgaacaagcagcgggccgccgataccggtttccgcgtcggccag
caggtgttccataccaagttcggcgaaggcacggtcaccgcgctcgaaggcaacggcacc
gatgcgaaggcacaggtgaaattcaagcggcacggcgagaagtggctcgcgctcgcggtc
gcgaaactgcaggcggtggaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

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