KEGG   Bacillus cereus FRI-35: BCK_07360
Entry
BCK_07360         CDS       T02291                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
bcer  Bacillus cereus FRI-35
Pathway
bcer03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bcer00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BCK_07360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bcer03021]
    BCK_07360
   03400 DNA repair and recombination proteins [BR:bcer03400]
    BCK_07360
Enzymes [BR:bcer01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BCK_07360
Transcription machinery [BR:bcer03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BCK_07360
DNA repair and recombination proteins [BR:bcer03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BCK_07360
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_3 RNA_pol_Rpb1_2 RNA_pol_Rpb1_4 RPOC_hybrid Apocytochr_F_C
Other DBs
NCBI-ProteinID: AFQ09379
Position
complement(1459508..1463119)
AA seq 1203 aa
MIDVNNFEYMKIGLASPDKIRSWSYGEVKKPETINYRTLKPEKDGLFCERIFGPQKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTESGDTPLDKKQLLSEKEYRAYRDRYGSTFQAAMGAEAIKKLLQ
DIDLDKEVDFLKEELKTAQGQRRTRAIKRLEVLEAFRNSGNEPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVEKGLAHNIKSAKRKIERVQPEVWDVLESVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSSEAQAEARLLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLEREGAIGEGMVFKDANEALLAYQNGYVHLHTRVAVA
ASAVNNATFTEEQKSMLLLTTVGKLIFNEILPESFPYINEPTNSNLEKETPAKYFVEKGA
NIKEIIASREEVAPFSKKILGNIIAEVFKRFKITETSRMLDRMKNLGFKYSTKAGITVGV
SDILVLGEKDEILHEAQAKVDNVIKQFRRGLITEEERYDRVISIWSNAKDVIQGKLMKSL
NKRNPIFMMSDSGARGNASNFTQLAGMRGLMANPSGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIVREDDCGTDRGLLIGAIKEGNEVIESLY
DRLVGRFARKTVKHPETGEVLVAENQLITEDIAHIVENSGVETVNIRSAFTCNTRHGVCK
KCYGRNLATGTDVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIF
EARNPKGQAVISEIDGVIAAINDVKDRQEVVVQGEVETRTYAIPYGARLKVIPGQQISHG
KELTEGSIDPKELLKVTDITAVQEYLLREVQKVYRMQGVEIGDKHVEVMVRQMLRKVRVS
DAGETDVLPGTLLDIHQFTDANAKVLLQGKQPATARPVLLGITKASLETDSFLSAASFQE
TTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMNRYRKVDLVKTTQDDMNVENDEVY
VEQ
NT seq 3612 nt   +upstreamnt  +downstreamnt
ttgatagatgtaaataactttgaatatatgaagattggacttgcttcacctgacaagatt
cgttcttggtcatacggtgaagttaagaaaccagaaacaattaactatcgtacgttaaag
cctgaaaaagatggcttgttctgtgagcgtattttcggaccacaaaaggactgggaatgt
cattgcggaaaatacaaacgtgtacgttataaaggtgtagtttgtgatcgatgtggcgtt
gaagtaacgcgtgcgaaagtgcgtcgtgaacgtatgggtcatatcgaattagctgctcct
gtatctcatatttggtatttcaaaggtatcccgagccgcatgggacttgtcttagacatg
tcccctcgcgcgcttgaagaagtaatttatttcgcttcttatgttgtaacagaaagtgga
gatacaccacttgataagaagcaattactttctgaaaaagaataccgtgcatatcgtgat
cgatatggtagcacattccaagctgctatgggtgcagaagcgattaaaaagctattacaa
gacatcgatttagataaagaagtagacttcttaaaagaagaattaaaaacagcacaagga
caacgccgtactcgtgctattaaacgtctagaagtattagaagcattccgtaattctgga
aatgagccatcttggatgatcttagatgttctaccagtaatcccaccagaactacgccca
atggtacagttagatggtggacgttttgctacttctgacttaaacgacttataccgtcgt
gtaattaaccgtaacaaccgtttaaaacgtctattggacttaggtgcaccaagcattatc
gttcagaacgaaaaacgtatgttacaagaagctgtagacgcattaatcgataatggtcgt
cgtggccgtccagttactggaccaggtaaccgtccattaaaatcactatctcacatgctt
aaaggtaaacaaggacgcttccgtcaaaacttattaggtaaacgtgttgactactctggt
cgttctgtaatcgttgtaggaccgaacttaaagatgtaccaatgtggattaccaaaagag
atggcgcttgaactgttcaaacctttcgtaatgaaagagttagttgaaaaaggattagca
cacaacattaagagtgcgaaacgtaaaatcgagcgtgtacaacctgaagtttgggacgtt
ttagaatctgtgattaaagaacatccagtacttctaaaccgcgcaccaacacttcaccgt
cttggtattcaggcgtttgaacctacattagtagaaggtcgcgcaatccgtcttcaccca
cttgtatgtactgcatacaacgcggactttgacggtgaccaaatggccgttcacgtacct
ttatcatcagaagcacaagcagaagctcgtcttcttatgttagcggcacaaaacatcttg
aacccgaaagacggtaaaccagttgttactccatctcaggatatggtattaggtaactac
tacttaacacttgagcgtgaaggtgcaatcggtgaaggtatggtcttcaaagatgcgaac
gaggcattacttgcataccaaaatggatatgtacatcttcatacacgtgttgcagtagct
gcaagcgcagtaaacaacgcaacatttactgaagaacaaaagagtatgcttctattaaca
acagttggtaaattaatatttaacgaaatcttaccagagtcgttcccttatattaatgaa
ccaacaaattcaaaccttgaaaaagaaacaccagcgaaatatttcgttgaaaaaggtgcg
aacattaaagagattattgctagtcgcgaagaagtggcgccattcagcaagaaaatcctt
ggtaacatcattgcggaagtgtttaaacgtttcaaaattacagaaacgtctcgcatgctt
gaccgtatgaaaaacttaggattcaagtactctacaaaagctggtattacagttggggta
tctgacattcttgtattaggtgaaaaagatgaaattctccacgaagcacaagcaaaagta
gataatgtaattaaacaattccgtcgcggtttaatcacggaagaagaacgttacgatcgc
gttatctctatttggagtaatgcaaaagatgttatccaaggaaaactgatgaaatccttg
aataaacgcaacccaatcttcatgatgagtgattccggtgcccgtggtaacgcatcgaac
tttactcagcttgctggtatgcgtggtctgatggccaatccatctggtcgtatcatcgaa
cttccaatcaaatcaagtttccgtgaaggtttaacagtacttgagtacttcatctctacg
catggtgcgcgtaaaggtcttgccgatacagcactgaaaactgccgattctggttactta
acacgtcgtcttgttgacgttgcacaagatgtaatcgttcgtgaagatgattgtggaaca
gatcgcggtttattaattggtgcgattaaagagggtaatgaagttatcgagtcattatat
gatcgtcttgttggacgttttgcaagaaaaactgtaaaacatcctgaaacaggtgaagta
ttagttgctgaaaatcaattaattactgaagatatcgctcatatcgttgaaaattcgggt
gttgaaactgtaaacattcgttcagcgttcacgtgtaacactcgccacggtgtatgtaag
aagtgttacggccgtaacttagcaactggaacagacgtagaggtaggggaagcggtaggt
attatcgcagctcaatctatcggtgagccaggtacacagttaacgatgcgtacgttccat
acaggtggggttgccggagatgatatcactcaaggtttacctcgtatccaagagatcttc
gaagctcgtaatccgaaaggtcaggcagttatcagtgaaatcgacggtgttatcgcagcg
atcaacgatgttaaagatcgccaagaagtagttgtacagggtgaagttgaaactcgtacg
tatgctattccttacggtgctcgtctgaaagtaattccaggacagcaaattagccacggt
aaagagttaacagaaggttctattgatccgaaagaattactaaaagtaacggacattacg
gcagttcaagaatacttattacgtgaagttcaaaaagtataccgtatgcaaggggtagaa
attggtgacaaacacgtagaagtaatggtacgccaaatgttacgtaaagttcgtgtaagt
gatgcaggtgaaacagatgtattaccaggaacattactagatatccatcagtttactgat
gccaatgcgaaggtgttactacaaggtaaacaaccagcaacagctagacctgttctactt
ggtattacaaaagcttcacttgaaacagattcattcttatctgcagcatcgttccaagaa
acaactcgtgtcttaactgatgcagcaattaagggtaaacgtgatgagcttctaggattg
aaagaaaatgttattatcggtaaacttgttcctgctggaacaggtatgaatcgttatcgc
aaagtggatcttgttaaaacaacacaagatgacatgaatgtagaaaacgatgaagtttat
gtggaacagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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