KEGG   Burkholderia cenocepacia DWS 37E-2: DM40_1061
Entry
DM40_1061         CDS       T03488                                 
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
bcew  Burkholderia cenocepacia DWS 37E-2
Pathway
bcew03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bcew00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DM40_1061 (recQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bcew03019]
    DM40_1061 (recQ)
   03400 DNA repair and recombination proteins [BR:bcew03400]
    DM40_1061 (recQ)
Enzymes [BR:bcew01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     DM40_1061 (recQ)
Messenger RNA biogenesis [BR:bcew03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     DM40_1061 (recQ)
DNA repair and recombination proteins [BR:bcew03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      DM40_1061 (recQ)
SSDB
Motif
Pfam: RQC DEAD HRDC RecQ_Zn_bind Helicase_C ResIII
Other DBs
NCBI-ProteinID: AIO42327
UniProt: A0AA86FMT7
Position
1:1165312..1167159
AA seq 615 aa
MSRALEILDEVFGYSAFRGQQGEIVEHVAGGGDCLVLMPTGGGKSLCYQIPALLRREAGH
GAGIVVSPLIALMQDQVAALSEVGVRAAFLNSTLSGAEAAATERALREGEIDLLYVAPER
LMTGRFLELLERAKIGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPSVPRIALTATAD
AITRDEIIHRLALDDARVFVSSFDRPNIRYRIVEKDNARSQLLDFIRAEHTNADGTTDAG
VVYCLSRRKVEETAEWLKAQGVRALPYHAGMEFEVRQKHQEMFQREEGIVMCATIAFGMG
IDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPANAWMAYGLGDVVQQRKMIDESDADD
AHKRVQTSKLDALLGLCETISCRRVRLLNYFGEASQPCGNCDTCLEPPDSWDATREAQMA
LSCVFRAQRASGFNFGANHLIEILRGNRTEKVLQRGHEQLSTFGIGASLSEPEWRAIFRQ
LVAYGYLAVDHGGFGALVLTEAAKPVLKNEEKVTLRRYVKPQRTRQSSSRSGTRVDPTAG
MGTRERARWDALRAWRAETAKSDGVPAYVIFHDATLAEIARNAPETIDDLRHIPGMGVRK
LERFGDEIIDVVESA
NT seq 1848 nt   +upstreamnt  +downstreamnt
atgtctcgcgccctcgaaatcctcgacgaagtctttggttattccgcatttcgcggccag
cagggcgagatcgtcgaacacgtcgccggcggcggcgattgcctcgtgctgatgccgacc
ggcggcggcaagtcgctgtgctatcagattccggcgctgctgcgccgcgaggccgggcac
ggcgcgggcattgtcgtgtcgccgctgatcgcgctgatgcaggaccaggtcgccgcgctc
agcgaggtcggcgtgcgcgcggccttcctgaactcgacgctgtccggcgccgaggccgcg
gccaccgagcgtgcgctgcgcgaaggcgagatcgacctgttgtacgtcgcgcctgagcgc
ctgatgaccgggcgctttctcgagctgctcgagcgcgcgaagatcggcctgtttgcgatc
gacgaggcgcactgcgtgtcgcagtggggtcatgacttccgccccgaatacatccagctg
tcggtgctgcacgagcgctttccgtcggtgccgcgcatcgcgctgacggccaccgccgac
gcaatcacccgcgacgagatcattcatcgcctcgcactcgacgatgcgcgcgtcttcgtg
tcgagcttcgatcgtccgaacatccgctatcggatcgtcgaaaaggacaacgctcgctcg
cagctgctcgacttcatccgcgccgagcatacgaatgcggacggcacaaccgacgcgggc
gtcgtctactgtctgtcgcgccgcaaggtcgaggaaaccgccgaatggctgaaggcgcag
ggcgtgcgcgcgctgccgtatcacgccgggatggaattcgaggtgcgtcagaagcaccag
gaaatgttccagcgcgaggaaggcatcgtcatgtgcgcgacgatcgcattcggcatgggc
atcgacaagccggacgtgcgcttcgtcgcccacctcgatttgccgaagagcgtcgaaggc
tattaccaggaaaccggtcgcgcgggccgcgacggattgcctgcgaatgcgtggatggca
tacggcctcggcgacgtcgtgcagcagcgcaagatgatcgacgaatcggatgcggacgac
gcgcacaagcgcgtgcagacgtcgaagctcgacgcgctgctcgggctgtgcgagacgatc
tcgtgccgccgcgtgcggctgctgaattacttcggcgaagcgagccagccgtgcggcaac
tgcgacacatgcctcgagccgccagattcctgggatgcgacgcgcgaggcgcagatggcg
ttatcgtgcgtgttccgcgcgcagcgcgcgagcggcttcaatttcggcgcgaaccatctt
atcgagatcctgcgcggcaaccgcaccgagaaggtgctgcagcgcggacacgaacaactg
agcacgttcgggatcggcgcgtcgctgtccgagccggagtggcgcgcgattttccggcaa
ctcgtcgcgtacggctatcttgccgtcgatcatggcggtttcggtgcgctggtgctcacc
gaggccgcgaagcccgtgctgaagaacgaggagaaggtcacgctgcgccgctatgtgaag
ccgcagcgcacgcgccagtcgtcgagccgcagcggcacgcgcgtcgatccgacggccggc
atgggcacgcgcgagcgcgcgcgctgggacgcgctgcgcgcgtggcgtgcggaaaccgcg
aagtccgacggcgtgcccgcctacgtgatcttccacgacgcgacgctcgccgaaatcgcg
cgcaacgcgccggagacgatcgacgaccttcgccacatccccggcatgggcgtacgcaag
ctcgaacgcttcggcgacgagatcatcgacgtcgtcgaatcggcgtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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