KEGG   Baudoinia panamericana: BAUCODRAFT_78185
Entry
BAUCODRAFT_78185  CDS       T03106                                 
Name
(RefSeq) hypothetical protein
  KO
K03679  exosome complex component RRP4
Organism
bcom  Baudoinia panamericana
Pathway
bcom03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bcom00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BAUCODRAFT_78185
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bcom03019]
    BAUCODRAFT_78185
Messenger RNA biogenesis [BR:bcom03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     BAUCODRAFT_78185
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     BAUCODRAFT_78185
SSDB
Motif
Pfam: RRP4_S1 ECR1_N KH_6 RRP40_S1
Other DBs
NCBI-GeneID: 19117154
NCBI-ProteinID: XP_007680498
JGI: Bauco1_78185
UniProt: M2LEW1
Position
Unknown
AA seq 305 aa
MDIDELPSGHGHSVKVITPGETITDDPQWMRGHGTFAGADSITIRSTLAGTLQKTNKLLS
IVPLRARYTPEIGDLVIGRIVEVQGRRWKVDVAAPLLANLLLSSINLPGGVLRKRTSVDE
LNIRAFFGEGELLVAEVQSLFQDGSASLHTRSLRYGKLRNGYFMSVSGMGGGAGVVRAKR
QIFTLQTTRSGGEVDVILGVNGYIWISKHVADEKKEDVGINRLEETASTSMYSSQNDVVE
AETRQEIATIASCIRALIEGGVKVEEETVRRAYDACLELNSQDDSTAYLGGERGKTIVQL
VLAGA
NT seq 918 nt   +upstreamnt  +downstreamnt
atggacattgacgagttaccctccggccatggtcactctgtcaaagtcataaccccaggc
gagacgatcacggacgacccacaatggatgcgcggccacgggaccttcgcaggcgcagac
agcataactattcgtagcaccttggccggcacacttcaaaagaccaacaaattgctctct
atcgtacctctccgcgcccgttacacaccagagatcggtgaccttgtcattggtcgcatt
gtagaagtccaggggcgacggtggaaggttgatgtggctgcgccactacttgctaacttg
ctgctatcttccatcaatctcccgggtggcgttcttcgtaaacggaccagcgttgatgag
cttaacatccgtgctttcttcggcgaaggtgagctgctggttgcagaggtgcagagtctc
tttcaggatggcagcgcttctttgcatactcggtctctgcgatacggcaagctgcgcaac
ggctatttcatgtccgtatccggtatgggtggtggtgcaggcgtggtaagagctaagcgg
cagatcttcactctgcagaccacacgtagcggaggcgaagtcgacgttattctgggcgtc
aatggctacatctggatctcgaagcatgtggctgacgagaagaaagaagacgtcggcatc
aaccggcttgaggaaacggctagcacgagtatgtatagctcgcagaacgacgtggttgag
gccgagacacggcaggagattgccaccatcgccagctgtatccgcgcactgatagagggc
ggcgtgaaagtggaagaggagacggtgaggagggcttacgatgcgtgcctggagctgaac
tcgcaggacgacagtactgcctacctgggcggcgagaggggcaagacgatcgttcagctg
gtgctggctggtgcttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (29)   

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