KEGG   Burkholderia cepacia GG4: GEM_4878
Entry
GEM_4878          CDS       T02205                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
bct  Burkholderia cepacia GG4
Pathway
bct03030  DNA replication
bct03410  Base excision repair
bct03420  Nucleotide excision repair
bct03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bct00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GEM_4878
   03410 Base excision repair
    GEM_4878
   03420 Nucleotide excision repair
    GEM_4878
   03440 Homologous recombination
    GEM_4878
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bct03032]
    GEM_4878
   03400 DNA repair and recombination proteins [BR:bct03400]
    GEM_4878
Enzymes [BR:bct01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     GEM_4878
DNA replication proteins [BR:bct03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     GEM_4878
DNA repair and recombination proteins [BR:bct03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     GEM_4878
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     GEM_4878
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc
Other DBs
NCBI-ProteinID: AFQ51265
UniProt: A0A9W3PC71
Position
2:complement(1900479..1903232)
AA seq 917 aa
MPEERNLEGKTLLLVDGSSYLYRAYHAMPDLRGPGGEPTGALYGIINMLRRMRKEVSAEY
SACVFDAKGKTFRDDLYADYKANRPSMPPDLALQVEPIHGAVRALGWPLLMVEGVEADDV
IGTLAREAERHGMNVIVSTGDKDLAQLVSDHVTLVNTMTNETLDRDGVIAKFGVPPERII
DYLALIGDTVDNVPGVEKCGPKTAVKWLSQYDSLDGVIEHAGEIKGVVGDNLRRALDFLP
LGRTLVTVETACDLAPHLESIEASLKTDGEARDLMRDIFARYGFKTWLREVDSAPAEGGG
ADVPEGEPAQVVAADIVREYEAIQTWAQFDAWFAKIDAAALTAFDTETTSLDPMVARLVG
LSFSVEPGKAAYLPVAHRGPDLPEQLPLDDVLARLKPWLEAADRKKVGQHLKYDAQVLAN
YDIALNGIEHDTLLESYVLESHRTHDMDSLALRHLGVKTIKYEDVAGKGAKQIGFDQVAL
EQAAEYAAEDADITLQLHQALYPQVAREAGLERVYRDIEMPVSLVLRKMERTGVLIDDAR
LQAQSSEIAARLIELEGQAYELAGGEFNLGSPKQIGQIFFEKLQLPVVKKTPSGAPSTDE
EVLQKLAEDYPLPKLLLEHRGLSKLKSTYTDKLPRMVNPATGRVHTNYAQAVAVTGRLAS
NDPNLQNIPVRTAEGRRIREAFIASPGHRIVSADYSQIELRIMAHISGDASLLRAFSQGE
DIHRATAAEVFGVTPLEVNSDQRRIAKVINFGLIYGMSAFGLASNLGITRDAAKLYIDRY
FARYPGVAQYMEDTRAVAKEKGYVETVFGRRLWLPEINGGNGPRRQAAERAAINAPMQGT
AADLIKLSMIAVDDWLTRDRLASKMIMQVHDELVLEVPDSELSLVREKLPEMMCGVAKLK
VPLVAEVGAGANWEEAH
NT seq 2754 nt   +upstreamnt  +downstreamnt
atgcctgaagaacgaaatctggaaggtaagaccctgctattggttgacggttcgagctat
ctgtatcgggcttaccatgcgatgcctgatttgcgtggcccgggcggggagccgaccgga
gcgctctacggaatcatcaacatgctgcgccgtatgcgcaaggaagtcagtgcagagtat
agcgcttgcgtgttcgatgcaaagggtaagacgttccgtgacgacctttatgccgactat
aaggcaaaccgtccgtcgatgccgcccgatctcgcattgcaggtcgaaccgatccacggc
gccgtgcgtgcgctcggctggccgctgctgatggtcgagggcgtcgaagccgacgacgtg
atcggcacgctcgcgcgcgaagccgaacggcacgggatgaacgtgatcgtgtcgaccggc
gacaaggatctcgcgcagctcgtctccgatcacgtcacgctcgtcaacacgatgaccaac
gagacgctcgatcgcgacggcgtgatcgcgaagttcggcgtgccgcccgagcggatcatc
gattacctcgcgttgatcggcgacaccgtcgacaacgtgccgggcgtcgagaagtgcggg
ccgaagacggccgtgaaatggctgtcgcaatacgacagcctcgacggcgtgatcgaacac
gcgggcgagatcaagggtgtggtcggcgacaacctgcgccgcgcgctcgacttcctgccg
ctcggccgcacgctcgtgaccgtcgagacggcttgcgatctcgcaccgcatctcgagtcg
atcgaagcgtcgctgaagaccgacggcgaagcacgcgacctgatgcgcgacatctttgcg
cgctacggcttcaagacgtggctgcgcgaagtcgacagcgcgcccgcagagggcggcggc
gccgacgtgccggaaggcgagcccgcacaagtggtggcagcggacatcgtccgcgaatac
gaagcgatccagacctgggcgcagttcgatgcgtggttcgcgaagatcgatgcggccgcg
ctgaccgcgttcgacaccgaaaccacctcgctcgatccgatggtcgcacggctcgtcggc
ctgtcgttctcggtcgagccgggcaaggccgcgtatcttccggtcgcgcaccgcggcccg
gacctgcccgagcagcttccgctcgacgacgtgctcgcgcgcctgaagccgtggctcgaa
gcggccgatcgcaagaaggtcggccagcacctgaagtacgacgcgcaggtgctcgcgaac
tacgacatcgcactgaacggcatcgagcacgacacgctgctcgagtcgtacgtgctcgaa
tcgcaccgcacgcacgacatggacagcctcgcgctgcgtcatctgggcgtcaagacgatc
aagtatgaagacgtggccggcaagggcgcgaagcagatcggcttcgaccaggtagcgctc
gagcaggccgccgagtatgcggccgaagatgcggacatcacgctgcagcttcatcaagcg
ctgtatccgcaggtcgcacgcgaagcgggcctcgagcgcgtgtatcgcgacatcgagatg
ccggtatcgctcgtgctgcgcaagatggagcgcaccggcgtgctgatcgacgacgcacgc
ctgcaggcgcaaagcagcgagatcgcggcgcggctcatcgagctcgaagggcaggcgtac
gaactggccggcggcgagttcaatctcggctcgccgaagcagatcggccagatcttcttc
gagaagctgcaactgccggtcgtgaagaaaacgccgagcggtgcgccgtcgaccgacgaa
gaagtgttgcagaagcttgccgaggattacccgctgccgaagctgctgctcgagcatcgc
gggctgtcgaagctgaagtcgacctacaccgacaagctgccgcgcatggtgaatcccgcc
acgggccgcgtgcatacgaactatgcgcaggctgtcgcggtcacgggccgcctcgcgtcg
aacgatcccaatcttcagaacattccggtgcgcacggccgaaggccggcggatccgcgaa
gcgttcatcgcatcgccgggccaccggatcgtgtcggccgattattcgcagatcgaactg
cggatcatggcgcacatttccggcgacgcgtcgctgctgcgcgcgttctcgcagggtgaa
gacattcaccgcgcaaccgccgccgaagtgttcggcgtgacgccgctggaggtcaattcc
gaccagcgccggatcgcgaaggtgatcaacttcgggctcatctacgggatgagcgcgttc
ggcctcgcgtcgaacctcggcatcacgcgcgatgcggcgaagctctacatcgaccgctat
ttcgcgcgctacccgggcgtcgcgcagtacatggaagacacgcgcgccgtggcgaaggag
aagggctacgttgaaaccgttttcggtcgccgtctgtggctgccggagatcaacggcggc
aacggtccgcgccgccaggcggccgaacgcgcggccatcaatgcgccgatgcagggcacg
gcggccgacctgatcaagctgtcgatgatcgcggtcgacgactggctcacgcgcgaccgg
ctggcgtcgaagatgatcatgcaggtacacgatgaactggtgctcgaggtgcccgacagc
gaactgtcgctcgtgcgcgagaagctgccggaaatgatgtgcggcgtcgccaagctgaag
gtgccgctggtcgcggaagtgggcgccggcgcgaactgggaagaggcacactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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