KEGG   Beutenbergia cavernae: Bcav_1922
Entry
Bcav_1922         CDS       T00893                                 
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
bcv  Beutenbergia cavernae
Brite
KEGG Orthology (KO) [BR:bcv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bcv03032]
    Bcav_1922
   03400 DNA repair and recombination proteins [BR:bcv03400]
    Bcav_1922
Enzymes [BR:bcv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     Bcav_1922
DNA replication proteins [BR:bcv03032]
 Prokaryotic type
  DNA Topoisomerases
   Bcav_1922
DNA repair and recombination proteins [BR:bcv03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Bcav_1922
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c
Other DBs
NCBI-ProteinID: ACQ80178
UniProt: C5C5I7
Position
2188626..2190752
AA seq 708 aa
MTTAAPESTYTARHLSVLEGLEAVRKRPGMYIGSTDSRGLMHCVWEIIDNSVDEALGGHG
EAIDIVLHPDSSVEVRDSGRGIPVDTVERLGLSGVEVVFTKLHAGGKFGGSSYGSSGGLH
GVGASVVNALSARLDVEVDRAGKTYRMTFRRGEPGTFDDGAVPSPEAPFAPFTDHSELAV
VAKVPRGRTGTRVRYWADRQIFPVSAAFAYDELLTRARQTAFLVPGLSITVRDERRLPGT
PGEGGVVEEVFRYDGGVRDFADYLSPDASVTDTWLLRGSDTFTESIQALDDAGHLRAQEV
ERTCEVDVALRWGIGYETEVRSFVNIIATPKGGSHLAGFEQGLLKTVRKQVEVNARRLKL
TGKNGKERIEKDDVMAGLTAVVTVRLPEPQFEGQTKEVLGTAPVRAIVARVVERELTALL
TSTKRGEKTQAAAVLDKVVDEMRARVAARTHKEISRRKNALETSSLPAKLADCRSDDVDR
SELFIVEGDSALGTAKLARDSDFQALLPIRGKILNVQKASLADMLKNLECAAIIQVLGAG
SGRTFELEAARYGRVVLMTDADVDGAHIRTLLLTLFFRYMRPLVEAGRVFAAVPPLHRVE
ISGSGGRKPEVVYTYSESELRQLLAKLEKSGRRYKQPIQRYKGLGEMDAHQLAETTMDPA
HRTLRKIRLSDLERAEQVFELLMGNDVAPRKDFLVAGAAELDRDRIDA
NT seq 2127 nt   +upstreamnt  +downstreamnt
gtgaccaccgcagcgcccgagtcgacctacaccgcacggcacctgtccgtgctcgaaggg
ctcgaggccgtccgcaaacggcccgggatgtacatcggctcgacggactcgcgcggcctc
atgcactgcgtgtgggagatcatcgacaactccgtggacgaggcgctcggcggccacggc
gaggcgatcgacatcgtgctgcacccggactcctcggtggaggtccgtgactccggtcgc
ggcatcccggtcgacaccgtcgaacgcctggggctctccggcgtcgaggtcgtgttcacc
aagctccacgccggcgggaagttcggcggctcgtcctacggctcctcgggcgggctccac
ggcgtcggcgcgtcggtcgtcaacgcgctgtcggcgcggctcgacgtcgaggtggaccgg
gcgggcaagacctaccgcatgacgttccggcgcggcgagccggggacgttcgacgacggc
gcggtgccgagcccggaggcgccgttcgcgccgttcaccgaccactccgagctcgccgtc
gtggcgaaggtgccgcgcgggcgcaccggcacccgcgtgcgctactgggcagaccggcag
atcttcccggtctcggcggcgttcgcgtacgacgagctgctcacgcgcgcccggcagacg
gcgttcctcgtgccggggctgtccatcacggtgcgcgacgagcgccggctgcccgggacg
cccggggagggcggcgtcgtcgaggaggtcttccggtacgacggcggcgtgcgggacttc
gccgactacctcagccctgatgcgtcggtcaccgacacctggctcctgcggggctcggac
acgttcaccgagagcatccaggcgctcgacgacgccgggcacctgcgtgcgcaggaggtg
gagcgcacgtgcgaggtggacgtcgcgctccgctgggggatcggctacgagaccgaggtc
cgcagcttcgtcaacatcatcgcgacgcccaagggcggcagccatctggccgggttcgag
cagggcctgctcaagacggtccgcaagcaggtcgaggtcaacgcgcgtcgcctcaagctc
acgggcaagaacggcaaggagcggatcgagaaggacgacgtcatggccggtctcacggcc
gtggtcacggtccggctccccgagccgcagttcgagggccagacgaaggaggtcctcggc
accgccccggtgcgcgccatcgtcgcccgggtcgtcgaacgcgagctcaccgcgttgctg
acctccacgaagcgcggcgagaagacgcaggcggccgcggtgctcgacaaggtggtcgac
gagatgcgtgcccgggtggccgcgcgcacgcacaaggagatctcccggcgcaagaacgcc
ctggagacgtcgtccctgccggcgaagctggcggactgccgcagcgacgacgtcgaccgc
tccgagctgttcatcgtggagggggacagcgcgctcggcaccgccaagctggcccgtgac
tcggacttccaggcgctcctgccgatccgcgggaagatcctcaacgtccagaaggcgtcc
ctcgccgacatgctcaagaacctcgagtgcgcggcgatcatccaggtcctgggcgcgggt
tcggggcggacgttcgagctggaggccgcgaggtacggccgggtcgtgctcatgacggac
gccgacgtggacggcgcccacatccgcacgctgctgctcacgctgttcttccggtacatg
aggccactggtggaggcgggtcgcgtgttcgccgccgtcccgccgctgcaccgcgtggag
atctcaggatccggagggcgcaagccggaggtcgtctacacgtactcggagtcggagctg
cggcagctgctcgcgaagctcgagaagtccggccggcgctacaagcagcccatccagcgc
tacaaggggctcggcgagatggacgcgcaccagctggcggagacgacgatggacccggcg
caccgcacgctgcgcaagatcaggctctccgacctcgagcgggcggagcaggtcttcgag
ctcctcatggggaacgacgtcgccccgcggaaggacttcctcgtcgccggcgccgcggag
ctcgaccgggaccggatcgacgcctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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