KEGG   Bacillus cereus E33L: BCE33L0279
Entry
BCE33L0279        CDS       T00198                                 
Symbol
ligA
Name
(GenBank) DNA ligase(NAD+) (NAD-dependent DNA ligase)
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
bcz  Bacillus cereus E33L
Pathway
bcz03030  DNA replication
bcz03410  Base excision repair
bcz03420  Nucleotide excision repair
bcz03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bcz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BCE33L0279 (ligA)
   03410 Base excision repair
    BCE33L0279 (ligA)
   03420 Nucleotide excision repair
    BCE33L0279 (ligA)
   03430 Mismatch repair
    BCE33L0279 (ligA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bcz03032]
    BCE33L0279 (ligA)
   03400 DNA repair and recombination proteins [BR:bcz03400]
    BCE33L0279 (ligA)
Enzymes [BR:bcz01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     BCE33L0279 (ligA)
DNA replication proteins [BR:bcz03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     BCE33L0279 (ligA)
DNA repair and recombination proteins [BR:bcz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     BCE33L0279 (ligA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BCE33L0279 (ligA)
   MMR (mismatch excision repair)
    DNA ligase
     BCE33L0279 (ligA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      BCE33L0279 (ligA)
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT DNA_ligase_ZBD RNA_pol_A_CTD HHH PTCB-BRCT HHH_3 BRCT_2 RNA_ligase 5_3_exonuc
Other DBs
NCBI-ProteinID: AAU19960
UniProt: Q63GS3
Position
327211..329220
AA seq 669 aa
MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP
SVRVGGTVLDIFEKVTHKSPMLSLGNAFNEGDLRDFDRRVRQGIDDANVRYICELKIDGL
AVSLHYEKGRFIQGATRGDGVTGEDITQNLKTIKAIPLRLNEEVTLEARGEAYMPKRSFV
KLNEEKEQNGEDVFANPRNAAAGSIRQLDPKIAAKRNLSMFVYGLANVEEKTIPSHSESL
DFLGELGFKTNPNRRTCETIEEVIAYVEEWQEKRPHLDYEIDGIVIKVDDVALQESLGTT
AKSPRWAIAYKFPAEEVVTRLTGIELSVGRTGVVTPTAELEPVRVAGTIVRRASLHNEDL
IREKDIRIGDYVVVKKAGDIIPEVVNVIFDKRTGEEEEYHMPTHCPACESELVRLEEEVA
LRCINPTCPAQIREGLIHFVSRNAMNIDGLGERVITQLFDADYIRTFADLYSLTKEQLLQ
LERFGEKSATNLVQAIENSKENSLERLLFGLGIRHVGAKAARTFAEHFETMDALVKATEE
ELKTINEIGEKMAQSVVAYFDNEDVLELLQQFKEYGVNMTYKGIKIADLQNVESYFAGKT
VVLTGKLEVMGRSEAKKKIEALGGKVTGSVSKSTDLVVAGEAAGSKLAQAEKHNVEVWNE
ERFLQELNK
NT seq 2010 nt   +upstreamnt  +downstreamnt
atgtcaaaagagatagcaaaaaaacgtatagaagaactacgtgatttgttaaatacattt
aactatcaatatcacgtattagacaatccttctgtttctgatgcggagtacgaccgtaat
atgcaggagcttataaaattagaagcagagaatccagagtttatgagtgaagattctccc
tccgttcgcgttgggggaacggttcttgatatatttgaaaaagtaacacataagtcaccg
atgttaagtttaggaaatgcatttaacgaaggagatttacgtgattttgaccgacgagta
cgtcaaggaattgatgatgcgaatgtaagatatatatgcgaattaaaaattgacggactt
gctgtttcacttcattatgaaaaaggacgcttcattcaaggggcaacacgtggtgatggt
gtaacaggtgaagatattacccaaaatttaaaaacgattaaagcaatcccgcttcgttta
aatgaagaagtaacgttagaagcacgaggcgaagcttatatgccgaagcgttcattcgtt
aagttaaatgaagaaaaagagcaaaatggtgaagatgtatttgcgaatccgcgtaatgcg
gcagcaggttcaatccgccaacttgatccgaaaattgcagcgaagcgtaacttatctatg
tttgtatacggtcttgcgaatgtagaagaaaaaacaattccatcacatagtgaatcgctt
gatttcttaggtgaacttggattcaaaacaaatccaaatcgtcgtacatgtgaaacaatt
gaagaagttatagcttatgtagaagaatggcaagaaaaacgtccgcatcttgattatgag
attgatgggatcgttataaaagtagatgatgttgctcttcaagaaagtctaggaactaca
gcaaagagtccaagatgggcgattgcttataaattcccagcggaagaagttgtaacaaga
ttaacgggcattgaattaagtgttggtcgtacaggggttgtaacaccgactgcagagcta
gagccagtgcgagtggctggtacgatcgttcgtcgtgcttctttacataacgaagattta
attcgtgaaaaagatattcgaattggtgactacgttgttgtgaagaaagctggagatatt
attcctgaagttgtaaatgttatttttgataagcgtactggtgaggaagaagaatatcat
atgccaacgcattgcccagcatgtgagagtgaactagttcgtttagaagaagaggtagca
cttcgttgtataaatccaacttgtcctgctcaaattcgagaagggttaatccatttcgtt
tcaagaaatgcaatgaatattgatggtcttggagaacgtgtcattacacaactctttgat
gctgattatattcgtacatttgcggatttatattcgttgacgaaagagcaattattacag
ttagaacgattcggagaaaaatcagcaacgaatttagtacaagcaattgagaattctaaa
gaaaactcattagagcgattattattcggtcttggtattcgccatgtcggagcgaaagca
gcacgtacatttgcagagcatttcgaaacgatggatgcacttgtgaaagcgacggaagaa
gaattaaaaacaattaacgagattggtgaaaaaatggctcaatccgtcgtggcgtatttt
gataatgaagacgtattagagctattacaacaatttaaagagtatggcgtgaatatgaca
tacaaaggtataaaaattgctgatttacaaaatgttgagtcgtactttgcaggaaaaact
gtcgttttaactgggaaattagaagttatgggacgtagtgaagcgaagaagaagattgag
gcattaggtggaaaagtaacaggaagtgttagtaaaagtacggatttagttgtcgcaggt
gaagcggcaggttcgaaattagcacaagcggagaaacataatgttgaggtttggaatgaa
gagaggttcttacaagagctaaataagtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (13)   
   Pfam (13)   
All databases (34)   

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