KEGG   Bacillus cereus E33L: BCE33L4818
Entry
BCE33L4818        CDS       T00198                                 
Symbol
vacB
Name
(GenBank) ribonuclease R (RNase R)
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
bcz  Bacillus cereus E33L
Pathway
bcz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bcz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BCE33L4818 (vacB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bcz03019]
    BCE33L4818 (vacB)
   03016 Transfer RNA biogenesis [BR:bcz03016]
    BCE33L4818 (vacB)
Enzymes [BR:bcz01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     BCE33L4818 (vacB)
Messenger RNA biogenesis [BR:bcz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BCE33L4818 (vacB)
Transfer RNA biogenesis [BR:bcz03016]
 Prokaryotic type
  tRNA degradation factors
   BCE33L4818 (vacB)
SSDB
Motif
Pfam: RNB CSD2 OB_RNB S1 OB_Dis3
Other DBs
NCBI-ProteinID: AAU15459
UniProt: Q631M8
Position
complement(4910465..4912897)
AA seq 810 aa
MEEIIQEHIDKLLLFMREEAYKPLTIQELEEAFGIEGSEGFKDFVKALVTMEEKGLVIRT
RSNRYGLPEKMNLVRGKLIGHARGFAFVVPDEKKTGDDDLFIPPTELNGALHGDTVLARL
SSQSSGSRQEGSIVRILERGTKELVGTYTESKNFGFVIPDNKRWTSDIFVLKSASMGAVE
GHKVVVKITSYPENRLSAEGEVIQILGHKNDPGVDILSVIHKHHLPLAFPEEVMEHANSV
PETISEEDLKDRRDLRDQMIVTIDGADAKDLDDAVTVTKLENGNYKLGVHIADVSHYVQE
GSPIDVEAAERATSVYLVDRVIPMIPHRLSNGICSLNPKVDRLTLSCEMEINNLGDVVKH
EIFQSVIKTTERMTYADVRSILEDEDEELIKRYEPLVPMFKEMGQLAQILREKRMRRGAI
DFDFKEAKVLVDEEGKPTDVVMRDRSVSEKLIEEFMLVANETVAEHFHWMNVPFMYRVHE
DPKEDKLERFFEFVTNFGYAVKGRANEVHPRALQQILEMVQGQPEEVVISTVMLRSMKQA
RYDADSLGHFGLSTEFYTHFTSPIRRYPDTIVHRLIREYIINGKVDNETQAKWREKLPEI
AEHSSNMERRAVEAERETDEMKKAEYMVDKIGEEYDGMISSVTNFGLFVELPNTIEGLVH
VSYLTDDYYRYDEQHFAMIGERTGNVFRIGDEITIRVINVNKDERAIDFEIVGMKGTPRR
KFKDRPVVIEQPRTGRKKRGGRSERSNERGGERGTGRKFDRGGKGKGRGSASASTSTSAS
QPGKKDGNGKKKKAFFENVPGFKKKKKKRK
NT seq 2433 nt   +upstreamnt  +downstreamnt
ttggaagaaatcatacaagaacatattgataagttgttattatttatgagagaagaagcg
tataaaccgctaacgatacaagagttagaagaggcatttgggattgaaggttctgagggc
tttaaagatttcgtaaaggcacttgtaacgatggaagaaaagggacttgttattcgtact
cgtagcaaccgttacggtcttcctgaaaagatgaatttagtacgtggtaagttaattgga
catgcacgtggctttgcattcgttgtaccagacgagaagaaaacaggagatgatgatctt
ttcatcccacctacagaattaaacggtgcacttcatggcgatacagtattagcacgcctt
agttcccaatcgagtggttcgcgtcaagaaggttccattgtacgcattttagagcgtggc
acgaaagaattagttggtacatatacagaatcgaaaaactttggatttgttatacctgac
aataaacgttggacaagtgacattttcgtattgaaaagcgcatcaatgggcgctgtagaa
ggtcataaagtagttgtgaaaattacgagctatccagagaatcgtttaagtgcagaaggt
gaagttattcaaattctaggtcataaaaatgatccaggagtagatattttatctgtcatt
cataaacatcacttgcctttagcgttccctgaagaagtgatggagcacgcaaacagtgta
ccagaaacgatttcagaagaagatttaaaagatcgccgtgacctacgtgaccaaatgatc
gtaacaattgacggtgcagacgcgaaagatttagatgatgctgttacagtaacgaagctc
gagaacggtaactataagcttggcgttcacattgcggatgtaagccattacgttcaagaa
ggttctccaattgatgtagaagcagcggaaagagcgacgagtgtatatcttgttgaccgt
gtaattccaatgattccacatcgtctatctaacggtatttgttcattaaatccgaaagta
gaccgtctgacgttatcttgtgaaatggaaatcaacaacttaggtgacgttgtcaaacac
gagattttccaaagtgtaattaaaacgacagagcgtatgacgtatgctgacgtaagaagc
attttagaagatgaggacgaagaattaattaagcgctatgaaccgttagtaccgatgttt
aaagaaatgggccaattggcacaaattttacgtgaaaaacgtatgcgccgcggtgcaatc
gactttgactttaaagaagcgaaagtattagtagatgaagaaggaaaaccgacagatgtt
gttatgcgtgatcgttctgtatcagagaagttaattgaagaatttatgcttgttgcgaac
gaaacagtagcagagcacttccactggatgaacgtaccattcatgtatcgtgtccatgaa
gatccgaaagaagataagttagagcgtttcttcgagtttgtaacgaacttcggatatgcg
gtaaaaggacgtgcgaatgaagtgcatcctcgtgcgctgcaacaaattcttgaaatggtt
caaggacagcctgaagaagtagtcatttcaacagttatgcttcgctcaatgaagcaagca
cgttacgatgcagatagcttaggacatttcggtttatcaacggagttctacacgcatttc
acatcaccaattcgtcgttatccagatacgattgttcatagattaattcgtgaatacatc
attaacggtaaagtcgacaatgaaacgcaagcaaaatggcgtgaaaaattacctgagatt
gcagaacactcttctaatatggaacgtcgtgctgttgaagcagaacgtgaaacagacgaa
atgaaaaaagcagagtacatggttgataagatcggcgaagagtatgacggtatgattagc
tctgtaacaaacttcggtttattcgtagagcttccaaatacaattgaaggtcttgtacat
gttagctacttaacggatgattactaccgttatgatgagcagcatttcgcaatgattgga
gaacgtacaggtaacgtattccgcattggtgacgaaattacaattcgcgttattaacgta
aacaaagacgagcgcgcaattgactttgaaatcgttggcatgaaaggtacgcctcgtcgt
aagttcaaagaccgcccagtcgttatcgaacagccaagaacaggcagaaagaaacgcggt
ggacgtagcgagcgtagtaatgagcgcggcggagaacgtggcacaggaagaaaatttgac
cgtggtggcaaaggaaaaggaagaggatctgcatccgcatccacatctacgtccgctagc
cagccagggaaaaaagatggtaacggcaagaagaaaaaagcattcttcgaaaacgtacca
ggattcaagaagaaaaagaaaaagcgtaagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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