KEGG   Phocaeicola dorei HS1_L_3_B_079: GV66_04765
Entry
GV66_04765        CDS       T03263                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
bdh  Phocaeicola dorei HS1_L_3_B_079
Brite
KEGG Orthology (KO) [BR:bdh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bdh03032]
    GV66_04765
   03400 DNA repair and recombination proteins [BR:bdh03400]
    GV66_04765
Enzymes [BR:bdh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     GV66_04765
DNA replication proteins [BR:bdh03032]
 Prokaryotic type
  DNA Topoisomerases
   GV66_04765
DNA repair and recombination proteins [BR:bdh03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      GV66_04765
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim Endonuc-HincII
Other DBs
NCBI-ProteinID: AII67068
UniProt: A0A6M4K537
Position
complement(1309674..1312112)
AA seq 812 aa
MQKNLVIVESPAKAKTIEKFLGNDYKVLSSYGHIRDLKKKEFSIDVENGFEPTYEIPADK
KKLVAELKAEAKKADMVWLASDEDREGEAISWHLFEVLGLDPEKTKRIVFHEITKTAILK
AIENPRDIDVNLVNAQQARRILDRIVGFELSPVLWKKVKPALSAGRVQSVAVRLIVERER
EVHAFVSEPSYRVTAVFEVPDVDGNEVEVKAELSNRFKTKEEAQAFLETCKDAQFSIEDI
ITRPVKKSPAAPFTTSTLQQEAARKLGFTVAQTMMVAQRLYENGQITYMRTDSVNLSDLA
LNTSKQTILSLMGERYVKVRKFATKTKGAQEAHEAIRPTYMENETVSGTGQEQKLYELIW
KRTIASQMADAELEKTTATIVISNSSEKFIATGEVITFDGFLRVYKESYDDDNEQEDEGR
LLPPLSKGEKLIRKEILATQRFTQCPPRYTEASLVRKLEELGIGRPSTYAPTISTVQQRG
YVEKGNSEGVKRPYDTLKLKGGKITEITKTEITGNEKAKLLPTDTGIVVNDFLMEYFPEI
MDFNFTANVEKEFDEVAEGEKEWTGMMDSFYKGFHPLVDKTIHSKTEHKVGERVLGTDPV
SGKPVSVKIGRFGPVIQIGTADDEEKPRFAQLAKGLSMETITLEEALDAFKLPRTLGDYD
GHTVTVGVGRFGPYVRYDKLFVSIPKGTDPMEISLDEAVELIKNKIEAQEKKFIKVFDAD
PDMQVLNGRYGPYISYQKKNYKIPENVEPADLSLEACFKVIELQKSKAETRKTKAASRNR
GTVNMEEEFEKTEESAKSKAVPKVKGTAKAKK
NT seq 2439 nt   +upstreamnt  +downstreamnt
atgcaaaaaaatctagtaatagttgagtcacccgctaaggctaaaaccattgagaaattc
ttgggtaatgattataaagtcctttccagttacgggcatatccgggatttgaaaaagaag
gagtttagtatcgatgtagagaatgggtttgagccgacttacgagataccggcagacaaa
aagaaattggtagccgaattgaaagcggaggcaaagaaagctgatatggtatggcttgca
tccgatgaggatcgtgaaggagaagctatttcatggcacttgtttgaagtcttggggctg
gaccctgagaagaccaagcgcattgtattccacgagataaccaaaacagcgatactaaag
gccatcgaaaatccgcgtgacattgatgtaaatctggtaaatgcccagcaagcacgccgt
attctggatagaattgtaggttttgaactttcaccggtattgtggaagaaggtaaagcct
gctctttctgccggacgtgtgcaatctgttgccgttcgtttgattgtggaacgtgaacgt
gaggtacatgcttttgtcagtgaaccgtcttatcgcgttacagcagtgtttgaagttcct
gatgttgatggaaatgaagttgaagtgaaagcagaattgtccaaccgtttcaagaccaag
gaggaagcacaggctttccttgaaacttgtaaggatgcgcagttctctattgaagatata
ataacccgccctgtgaagaaatcgccggcggcaccgtttactacttctacgttgcagcag
gaagctgcccgtaagttgggatttacagtagcgcagaccatgatggtggcacagcgtctg
tatgaaaacggacaaattacttatatgcgtacggattcggtgaacctttcggatttggct
ttgaatactagcaagcagactattttgtccctgatgggagaaagatatgtcaaagtccgt
aagtttgccaccaagactaaaggagcacaggaagcgcatgaggctatccgtcctacctat
atggagaatgagacggtgagcggaaccggtcaggaacagaaattgtatgaactgatctgg
aaacgtaccatcgcttcacagatggcagatgcggaactggagaaaacaacggctactatt
gtaattagtaacagcagcgagaaatttatcgctaccggcgaggtgattacttttgacggt
ttcctgcgtgtatataaggaatcatatgatgatgacaatgagcaggaggatgagggtcgt
ctgttgccgcctctaagcaaaggggaaaaactgataagaaaagaaattttggcaactcaa
cgctttacccaatgtccgccccgttatacggaagccagcctggtacgcaaactggaagag
ttgggcatcggtcgtccatctacatacgcacctaccatttctactgtgcaacaacgcggt
tatgtagaaaaaggaaacagtgaaggtgtgaaacgtccgtatgataccttgaaactgaaa
ggcggcaagattacggaaattaccaagacagagattacgggaaatgaaaaggccaagttg
ttacctactgataccggtatcgtggtaaacgatttcctgatggaatacttccctgaaatc
atggactttaactttacagcgaatgtggagaaagagttcgatgaagtggctgaaggagaa
aaggaatggactggtatgatggacagtttctataaaggtttccatccgttggtagataag
accattcactctaagactgagcataaggtgggtgaaagagtattggggacagatcctgta
agcggtaagccggtatcggttaagataggtcgtttcggtccggttattcagattggtact
gccgatgatgaagagaaaccgcgttttgcgcagttggcaaagggattgtctatggaaacc
attacgttggaagaagcgttggatgcgttcaagcttccccgtacgttgggggattatgac
ggtcacacggtgacggtaggagtagggcgtttcggaccatacgtgcgctatgacaaactg
tttgtttctattcctaaaggaacggacccgatggagatttctttggatgaagcggtcgaa
ctgatcaagaataagatagaagcgcaggagaagaagtttattaaagtattcgatgctgac
cctgatatgcaggtcttgaacggacgttacggtccatacatcagctatcagaaaaagaat
tataagatccctgagaatgtagaaccggcggatttaagtctggaggcttgttttaaggtg
attgaattgcagaaaagcaaggcggaaacccgtaaaacgaaagcggcttcaagaaacagg
ggaaccgtaaatatggaagaggagttcgaaaaaaccgaagaatccgctaaaagtaaggcg
gttcccaaggtaaagggcactgcaaaagcaaaaaaatga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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