KEGG   Brachypodium distachyon (stiff brome): 100825913
Entry
100825913         CDS       T01717                                 
Name
(RefSeq) chaperone protein ClpB1
  KO
K03695  ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
bdi  Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:bdi03110]
    100825913
Chaperones and folding catalysts [BR:bdi03110]
 Heat shock proteins
  HSP100
   100825913
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small Clp_N AAA_5 AAA_22 AAA_16 Sigma54_activat AAA_18 bpMoxR AAA_14 nSTAND3 AAA_7 IstB_IS21 ATPase_2 RuvB_N TniB AAA_23 AAA_28 TsaE NACHT DUF815 RNA_helicase Zeta_toxin AAA_19 Mg_chelatase ResIII DNA_pol3_delta2 AAA_25 T2SSE ABC_tran DUF87 DUF2987 DASH_Spc19 MoCoBD_1 DUF4426
Other DBs
NCBI-GeneID: 100825913
NCBI-ProteinID: XP_003568082
UniProt: I1HHI3
Position
2:17196627..17200267
AA seq 912 aa
MNPDNFTHKTNEALVAAHEAASEAGHAQITPLHLAASLAGDKSGILRQAIAQASGGDPAA
GDSFERVLSGALKKLPSQSPPPDSVPASTALIKAIRRAQSAQKKRGDSHLAVDQLLLGLL
EDSQISDCLKEAGVSASRVRAELEKLRGGDSRKVESASGDTNFQALKTYGRDLVEQAGKL
DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLLDVRL
IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN
LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVADTISILRGLKEKY
EGHHGVRIQDRAIVVAAQLSSRYIMGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER
KRIQLEVELHALEKEKDKASKARLVEVRKELDDLRDKLQPLTMKYRKEKERIDEIRKLKQ
RREELQFTLQEAERRMDLARVADLKYGALMEIDAAIAKLEGETGENLMLTETVGPEQIAE
VVSRWTGIPVTRLGQNDKERLVGMADRLHTRVVGQTEAVNAVAEAVLRSRAGLGRPQQPT
GSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGHEE
GGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTS
NLGAEHLLAGMVGKNSMKVARDLVMQEVRRHFRPELLNRLDEIVVFDPLSHEQLRKVARL
QMKDVAVRLAERGIALAVTDAALDVILSLAYDPVYGARPIRRWIEKRVVTQLSKMLIQEE
IDENCTVYIDASANKDELAYRVDRSGGLVNAETGQRSDILIQVPNGAVGGGEAAQAVKKM
RIMEEDGMDEDV
NT seq 2739 nt   +upstreamnt  +downstreamnt
atgaatcccgacaacttcacgcacaagaccaacgaggcgctggtggcggcacacgaggcg
gcgtcggaggccgggcacgcgcagatcacgccgctgcacctggcggcgtccctggcgggg
gacaagtccgggatcctgcggcaggcgatcgcgcaggcgtccggcggggacccggccgcg
ggggactcgttcgagcgcgtgctgagcggcgcgctcaagaagcttccctcgcagtccccg
ccgccggactccgtgccggcgtccacggcgctcatcaaggccatccgccgcgcgcagtcc
gcgcagaagaagcgcggggactcccacctggccgtcgaccagctgctgctcggcctcctc
gaggactcccagatctccgactgcctcaaggaggccggcgtgtcagcgtcccgtgtgcgc
gccgagctcgagaagctccgcggcggggacagccgcaaggtcgagtccgcgtccggcgac
accaacttccaggcgctcaagacgtacggccgcgacctcgtggagcaggccgggaagctc
gaccccgtcatcggccgcgacgaggagatccggcgcgtggtgcgcatcctgtcgcgccgc
accaagaacaacccggtgctcatcggcgagcccggcgtcggcaagacggccgtcgtggag
ggcctcgcgcagcggatcgtgcgcggggacgtgcccagcaatctcctcgacgtccgcctc
atcgcgctcgacatgggcgcgctcgtcgccggcgccaagtaccgcggcgagttcgaggag
cggctcaaggccgtgctcaaggaggtggaggaggccgaggggaaggtgatcctcttcatc
gacgagatacacctcgtcctcggcgctggcaggacggagggctccatggacgccgccaac
ctgttcaagccgatgctcgccaggggccagctccggtgcatcggcgccaccacgctggag
gagtaccggaaatacgtcgagaaggacgccgcgttcgagaggcggttccagcaggtgtat
gtcgccgagcccagcgtggccgacaccatcagcatcctcagagggctcaaggagaagtac
gaaggccatcacggtgtcaggatccaggaccgcgccattgtcgtcgccgcccagctctcg
tcaagatacatcatgggccggcacctgcctgacaaggccatcgacctggtagacgaggcg
tgcgcgaacgtgagggtgcagctggacagccagccggaggagatcgacaacctcgagcgg
aagaggattcagctggaggtggagctccacgcgctggagaaggagaaggacaaggccagc
aaagcccggctggtcgaggtccggaaagagctcgacgacctgcgggacaagctgcagcca
ctgacgatgaagtacaggaaggagaaggagcggatcgacgagatccggaagctgaagcag
cggcgggaggagctgcagttcacgctgcaggaggccgagcggcgcatggacctggcccgc
gtcgccgacctcaagtacggcgcgctcatggagatcgatgccgccatcgccaagctggag
ggggagaccggggagaacctgatgctcaccgagaccgtcggccccgagcagatcgccgag
gtggtcagccggtggaccggcatccccgtgacccggctcgggcagaacgacaaggagagg
ctcgtcggcatggccgaccggctgcacacgagggtcgtcgggcagacggaggccgtgaac
gccgtcgccgaggcggtgctgaggtcgcgggccggcctcggcaggccgcagcagcccacc
gggtccttcctcttcctcggcccgaccggcgtcggcaagacggagctcgccaaggccctt
gcagagcagctgttcgacgacgagaacctgctcgtccgcatcgacatgtccgagtacatg
gagcagcactccgtcgcccgcctcatcggagcaccacctggctacgttgggcatgaggaa
ggagggcaactgacggagcaggtgaggaggaggccgtacagcgtgatcctgttcgacgag
gtggagaaggcgcacgtggcggtgttcaacacgctcctccaggtgctcgacgacggccgg
ctgaccgacgggcaaggcaggacggtggacttccggaacaccgtgatcatcatgacctcc
aacctcggcgccgagcacctcctcgccgggatggtggggaagaactccatgaaggtcgct
cgcgatctcgtcatgcaggaggtgaggaggcacttccggccggagctgctgaaccggctg
gacgagatcgtggtgttcgaccctctgtcccatgagcagctcaggaaggtcgcccgtctt
cagatgaaggacgtggccgtccgcctcgccgagaggggcatcgccttggccgtcaccgac
gccgcgctggacgtcatcttgtccctggcttacgacccagtgtatggggcgaggccgatc
aggaggtggatcgagaagagggtggtgacgcagctgtccaagatgctgatccaggaggag
atcgacgagaactgcacggtgtacatcgacgcgtcggccaacaaggacgagctggcctac
agggtggaccggagcggcgggctggtgaacgccgagacgggacagaggtcggacatcctc
atccaggtgcccaacggcgccgtcggcggcggcgaggccgcgcaggccgtcaagaagatg
aggatcatggaggaggacggcatggacgaagacgtctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (37)   
   Pfam (37)   
All databases (48)   

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