KEGG   Brachypodium distachyon (stiff brome): 100838450
Entry
100838450         CDS       T01717                                 
Name
(RefSeq) geranylgeranyl transferase type-2 subunit alpha 1
  KO
K14050  geranylgeranyl transferase type-2 subunit alpha [EC:2.5.1.60]
Organism
bdi  Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:bdi01006]
    100838450
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bdi04131]
    100838450
Enzymes [BR:bdi01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.60  protein geranylgeranyltransferase type II
     100838450
Prenyltransferases [BR:bdi01006]
 Protein prenylation
  Rab geranylgeranyltransferase
   100838450
Membrane trafficking [BR:bdi04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    100838450
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
    100838450
SSDB
Motif
Pfam: PPTA LRR_4 LRR_6 LRR_8 LRR_9
Other DBs
NCBI-GeneID: 100838450
NCBI-ProteinID: XP_003563406
UniProt: I1GW43
Position
1:complement(28042842..28047039)
AA seq 696 aa
MHGQPRRPAKPEDDAAAAAKAAKLRDLQVQVLQNHHSRTYTEEALGLSFKLLEINPEAYT
AWNYRKLALQHNLRELTDPEAIKSSVDDELRVVEIALRQNPKSYGAWYHRKWLLNQKLTP
VDFKREFGLLDKLLKVDARNFHGWNYRRFLAKFMGVPEEEELKYTMDKICDNFSNYSAWH
NRSILLSNLLTQQRKGFESKQKICSEEFELVTQALFTDPSDQSGWFYHLWLLAQTSSPEN
PQLISSWPCNGAKLSLSLVGKKDDLNTVSSSLKEGIVPIVLYFNEPVKGLSPSTVKLNSD
LVIGNNIQWRPLSITDSGHSNCWATYLEITNKECSSSQQFSVEVSIPCSDDIVSRSGSHC
NCPVHFMFTIELGNNDDKARNIDLFHDPISWNGSESVQSHGNPSSVPFDHLNITDALVQE
ESKWHLEALSEQIDLFRELPDENSKFAKLTLARLSLACAAIKSRGNSPIERKGYCEEALG
FFSDLIYLDPSHKRYYEDERSSVQMDQLTCNMATFMEHCSDQVQSNLSPLNHVQLCRLAL
TRIGYPERLLWVQMLDLSHNNLRSVEGLEALQQLVCLNISNNQISGFTSLEPLTKIISLK
VLDLSCNEIGAHSIDTARYICLSPFSHKVEPCDAFEECRKKNINVEEFWDAILFFKSVNL
VQLDVKGNAVANKDTFRTVVMTLSPSLKFLDGTCVH
NT seq 2091 nt   +upstreamnt  +downstreamnt
atgcacggccagcctcgccgcccggcgaagccggaggacgacgcggcggccgcagcgaag
gccgccaagctccgggacctccaggtccaggtcctgcagaaccaccactcccgcacgtat
accgaggaggcgcttgggctgagcttcaagcttctcgagataaatccggaggcctatact
gcgtggaactaccggaagcttgccctgcagcacaatctcagggagcttactgacccagag
gccatcaagtcttctgttgacgacgagctcagagtggtggagattgctttgaggcaaaat
ccaaaatcttatggggcgtggtatcatcgcaagtggttgttaaatcaaaagcttacccca
gtggatttcaagcgtgaattcggcctattggataaactgttaaaggtggacgcaaggaac
ttccacggatggaattaccgcaggttcctcgctaagtttatgggggtgccagaagaggaa
gagcttaagtacacaatggataagatctgtgacaacttcagtaattactcagcatggcat
aatcgtagtatacttctgtccaatctgcttacccaacagaggaagggttttgagtcaaag
cagaagatatgttcagaggagtttgaacttgtaacccaagcactttttacagacccgagt
gaccaaagcggatggttctatcacctctggcttttagctcagacatccagtccagaaaat
ccacaactgatttcatcatggccttgcaatggtgccaaactaagtttatctctggttggg
aaaaaagatgacctgaacacagtgtcttcctcattgaaggaagggattgtgcccattgtt
ctctatttcaatgagcctgtcaaaggattaagtccatcaactgtgaagttgaattctgat
ttggtgattggtaacaatattcaatggaggcccctctcaataacagactctggacattcc
aactgttgggccacatatcttgaaattacaaacaaagaatgtagcagttcacaacaattt
tctgtagaagtaagtataccctgctcagatgacattgtgtctagaagtggctctcattgc
aattgtcctgtgcattttatgtttaccattgaactgggcaacaatgatgataaagcacgg
aatatcgatctgtttcatgacccaatttcctggaatggctcagaatcagtccaatctcac
ggaaaccccagttctgtcccttttgatcacctaaacatcactgatgccttggttcaagag
gagtcaaaatggcatttggaagcattgtctgaacaaattgaccttttcagagaattgcct
gatgagaatagcaaatttgccaagttgacattagcacggctatcgcttgcttgtgctgca
ataaagtcccgtggaaattctcccattgaaaggaagggatactgcgaagaggcactaggg
ttcttcagtgacctgatttacctggatccatctcataaaagatattatgaggatgagcgg
agctcagtccaaatggatcagttgacatgcaatatggcgactttcatggagcactgttca
gaccaagtgcaatcaaatctatctccgttaaatcatgtgcaactttgcagattggcatta
acacgcattggatatcctgagcgtttactgtgggttcaaatgctggacctaagccataac
aatctccgatcagttgaaggtttggaggctttgcagcagcttgtctgcctgaacatcagc
aacaaccagatcagtggtttcacatcacttgaacctctcacgaagataatttctttgaaa
gtactagatttatcatgtaacgagattggagctcactcgatagacacagcacggtatatc
tgcttatctccgttttcacacaaagtcgaaccatgtgatgcatttgaagagtgccgaaag
aaaaacatcaatgtcgaggaattctgggacgccattttgttcttcaaatctgtgaacttg
gtgcagcttgacgtcaaaggaaatgcagttgccaacaaagatacattcagaactgttgtg
atgacactcagtccttctctaaaattccttgacggcacatgtgttcattag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system