KEGG T01717: 100844955

Brachypodium distachyon: 100844955

Entry

100844955 CDS T01717

Definition

putative DNA ligase 4-like

Orthology

K10777

DNA ligase 4 [EC:6.5.1.1]

Organism

bdi Brachypodium distachyon

Pathway

bdi03450

Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:bdi03450]

SSDB

Motif

Pfam:

DNA_ligase_A_N DNA_ligase_A_M DNA_ligase_A_C BRCT DNA_ligase_IV PTCB-BRCT

Other DBs

NCBI-GI:

357168383

NCBI-GeneID:

100844955

Position

AA seq 1249 aa
MAATVRFGLLVAMFQAMSRDRTSAKKRGRLRAFLDRAYGAPGRDDYFSALRLVLPSLDRE
RGSYGLKEAALAAALVDALGIAKDSPDAVRLTNWRRGGGGSGRNAGNFSLVAAEVLQRRQ
GMTSGGLTIKEVNDALDHLSATENRXLIFRLHSCIXLKSQNQKFFLILDRSEKALVLSSL
IKKTNALEMKWLLMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLNDRSQR
HKRQDIEVGKAVRPQLAMRVSNASSAWKKLHGKPVVAECKFDGDRIQIHKNGEEIHFFSR
TFLDHSEYEPGMSRYIKENILVDRCILDGEMLVWDTALNRFAEFGSNQEIAKAARDGLET
DRQLCYVAFDILYAGDTSVIHQSLTERHEILRKVVKPLKGHLEILVPTGGLNVHRPSDEP
CWSIFAHNIEDAEKFFKETVDNRFLSTSNFLXQXXFNFPLLXSFNPSSVLREEGIVLKDL
DSKWEPGDRSGKWLKLKPDYIHAGTDLDVIIVGGYYGSGRRGGEVAQFLVGLAVPSNDNS
YPKRFLSFCRVGTGLSDEELDALVTKLKPHFRKNEYPKKPPRFYEVTNNSKERPDVWIES
PDKXALFHALVSCLFAGQSLRWRKNLIRXVTNCRSVIISVTSDIRTIKSEVFAAPYCLRF
PRIQQVRYDKPWHECLDVQSFVEIVHSSNGTMQKAEDDKSLKNDNNGGSFSMNLNDSVTH
CIAAEKKAIRHGRIIHYSWILECCKQKCLLRLQPKSVPLHKFLEEIDSYADFYYWDIDVA
DLKQIFSNMNTITVDQSIVQRYKKKHCADERFCFFQGCCVYLHHAPLVNEDYNVISDLAL
KRVKHDLTMHGGQVCSSLAPATHLVIVSVLQAYNFDISYKSFSPAERRYLHDKRLHVVSN
KWLEDSVDKQMKLPEALYNLKPDTLEEIHIERSEVDVQPSNDKHEEDEEVEISHVTNARK
RGRPSSSSSRTVRAAPRPVRRTRARRGNQRAKIGDVESEESGPGETGQDDQKLKADYTSK
MEEDNSDKDQRPPQAAPRPARRTSARRGNQLAKIDYLESEENDHGETGKADYTTKMEEDN
LDKDQGPPPGAQFITLEEQEPNGVKLSTGEDTTSSPRYKSKETSGRTNVAETTSTTGEKI
EQMFDPVHAMLLNMMPSLRQERRQDAITDPPATKLENNPPARAGSSTSSYRVPVPETVGS
ASNSGISASQTGSSTYSAGVPASDPNAAAPPKKKKVSYKDMANDLLKDW

NT seq 3750 nt +upstreamnt +downstreamnt
atggcggcgacggtgcgcttcgggctcctggtggcgatgttccaggccatgtcgcgggac
cgcacgtcggcgaagaagcggggccgcctccgcgcgttcctcgaccgcgcctacggggcc
ccgggccgggacgactacttcagcgcgctccgcctcgtcctcccgtcgctcgaccgcgag
cgcggctcctacgggctcaaggaggcggccctggccgcggcactcgtcgacgcgctcggc
atcgccaaggactcccccgacgccgtccgcctcaccaactggcgccgcggcggcggcggc
agcggccgcaacgccggcaacttctccctcgtcgccgccgaggtactgcagcggaggcaa
ggaatgacttctggcggcttgacgataaaggaggttaacgatgcactcgatcatctatct
gcaactgagaacaggtagcttatatttcgtttgcattcgtgtatatgactgaaaagtcag
aatcagaagttcttcctcattcttgataggtctgagaaggctttggttctttcaagtctg
atcaagaaaaccaatgcccttgaaatgaagtggcttctaatgattattcttaaggattta
aaactggggatcagtgagaagagcatattccatgagtttcatcctgatgctgaagacttg
ttcaatgtcacttgtgacttaaaattagtctgtgaaaagctcaatgatcgaagtcaaagg
cataaacgacaggatatagaagttggaaaggctgtcagacctcaactagctatgagagtc
agtaacgcttcatccgcttggaagaagcttcatggcaaaccagtggtcgccgagtgcaaa
ttcgatggggaccgtatccaaattcacaagaatggggaagagatccatttcttctcacgg
acctttcttgatcactccgaatatgaacctgggatgtccagatatatcaaggaaaatatc
ctggttgacaggtgtattttggatggagagatgcttgtttgggacacggcgcttaatcgg
tttgcagaatttggttcaaaccaggaaatagcgaaggccgcaagggatggactggaaact
gatcgacagctgtgctatgttgcttttgacattctttatgctggagacacaagtgttatt
caccaaagtttgacagagcggcatgaaattctgcggaaggttgtcaaacctttaaagggt
catcttgagattttggttccaacaggtggtctgaatgtccatcgtccttcagatgaacca
tgctggtccatttttgcacacaatattgaagacgcggagaaattcttcaaggaaactgtt
gataacaggtttctttccacttccaactttttgtagcagtagtaattcaattttcctctc
ttatgatcgttcaatccgtcgtctgtgcttagagaagagggaattgtactgaaggacctt
gattccaaatgggagcctggtgatcgaagtggaaagtggcttaaattaaagcctgattat
atacatgctggcactgatctggatgttattattgtaggtggatattatggatcaggacgt
cgaggaggagaggttgcacagtttttagttggtctggcagtgccttcaaatgataatagt
tatcccaaaagatttctttctttttgtcgagtcggtactggtctctctgacgaagaactt
gacgctcttgtcacgaaactgaagccacacttcaggaaaaatgagtaccccaagaaacca
cccagattttatgaagtaacgaacaattcgaaggagcggccagatgtttggatagaaagc
cctgataagtaagctttatttcatgctttggtttcttgtctttttgctggccagtctctc
aggtggaggaagaatctgatccgctaagtcactaattgcaggtcagtcataatatctgta
acgagtgatattcgaacaatcaaatctgaggtatttgccgccccgtactgcttgaggttc
ccccgcattcagcaagtgagatatgataagccatggcatgagtgcctcgatgtgcagtca
tttgtggagattgtgcattcaagtaatggcacaatgcagaaggcggaagatgataagagt
ctgaagaatgataataatgggggttctttctcaatgaatctcaatgactcagttactcac
tgcattgcagccgagaaaaaggccatacgtcacgggaggatcattcactattcctggatc
ttggaatgttgcaagcaaaaatgtcttcttcgtttgcaacctaagtccgtccctttgcac
aaatttcttgaagagatcgactcgtatgctgacttttactactgggatatcgatgttgct
gacctcaagcagattttcagcaacatgaacacaattactgtcgatcagagcattgtacaa
cggtacaaaaagaagcattgtgcagatgaaagattctgcttcttccagggttgctgcgtt
tacttacatcatgcacctttagtgaatgaggactacaatgtaatatctgatcttgcactg
aagagggtgaagcatgaccttaccatgcatggtggtcaggtctgcagcagccttgcccct
gctactcatttggttatagtttcagttctgcaggcctacaattttgacatatcgtacaag
agcttttctcctgctgagaggcgttatctacatgacaaaagattgcatgttgtcagtaat
aagtggttagaagattcagtggataaacaaatgaagctgcctgaagccctctacaacctt
aaaccggatacattagaagaaatacatattgaaaggagcgaagtagatgtccagccctct
aatgacaaacacgaggaagatgaggaggtcgaaatatctcatgttacaaatgcaaggaaa
aggggcaggccatccagtagtagttcacgaactgtaagggctgctcctaggccagtccga
agaacaagggctagaagaggaaaccagcgtgcaaaaataggtgatgttgagtctgaagaa
agtggccctggtgaaacaggtcaagatgatcaaaaattgaaagcagattacacctctaag
atggaagaagataacagtgacaaagatcaaagaccacctcaagctgctcctagaccagct
cggagaacaagtgctagaagaggaaatcagcttgcaaaaatagactaccttgaatctgaa
gaaaacgaccatggtgaaacaggcaaagcagattacaccaccaagatggaagaagataac
ctggacaaagaccagggaccacctccaggtgcccagtttatcacattggaggagcaagag
cccaacggtgtcaaattgagtaccggggaggatacaacaagcagtcctaggtacaaaagc
aaagaaacttctggaagaacaaatgttgctgaaacaaccagcacaacgggagaaaagata
gaacaaatgtttgatccagtgcacgcgatgcttctcaacatgatgccgtccctgcgccag
gaaaggagacaagacgcaatcacggatcccccagcaaccaaacttgagaacaatcctcca
gcacgggcaggaagttccacatcgagttacagggttccggtgccagagacggtaggctct
gcgtctaattccgggatctcggcatcgcagacagggagttcaacatacagtgcgggggtt
ccagcttcagatccaaacgctgctgctcctccaaagaagaaaaaagtgagctacaaagat
atggccaacgatctcctgaaagattggtga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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