KEGG   Brachypodium distachyon (stiff brome): 100845437
Entry
100845437         CDS       T01717                                 
Name
(RefSeq) nuclear poly(A) polymerase 3
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100845437
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bdi03019]
    100845437
Enzymes [BR:bdi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     100845437
Messenger RNA biogenesis [BR:bdi03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     100845437
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 Nrap_D2 Hemolysin_N
Other DBs
NCBI-GeneID: 100845437
NCBI-ProteinID: XP_003559765
UniProt: A0A0Q3RNH9
Position
1:complement(13777640..13782504)
AA seq 554 aa
MPPPDAATYAPTLPMATYLPIGTPSSSSSSPAAAAGAPEPQTLPFFLSPLPLPPPPLPAG
HRVLSSLPPPPPRWPIAVRVPPAFLFEADFRRSHSLVQFLENEGAVPTVEEDKTREQVIR
KLKEIVMDWAKVVAYEQRVPPRRVTATVLTYGSYTLGAHGPESDIDALCVGPCIATLQHH
FFVALRQILERRLEVSGMQTVENAKVPLMRFTFSGISVDLTYAQLPVVDAVEAINTSSPQ
FLRRLDSRSWRSLSGVRVNEQIVQLVPNAKKFQVLLRSIKLWARRRGLHCHLLGFFAGIH
LAILAAYICQRYPNATANGLFTMFFEIFAHWDWQIPVNLHGQPTNCKRSDGYYMPIVMPC
TPPELCMSNMTKCTFKKIREELMRGYALTKDLWRHDFEWTWLFAPFPYATRYQQFLRIAL
CSPTSEELRDWTGWVKSRFRQLILKLERNGLECDPYSSEEVDHRVIKPNIMYHWGLISEA
NTYLDISSLREDFMKDIINDVYGKVKCRRSELTLSVVGSSQLPKSMYSDSAYLGYMPQYM
VGYQPAPDCWSAAG
NT seq 1665 nt   +upstreamnt  +downstreamnt
atgcctccgccggacgcggccacctacgctcccacgctgccaatggcgacgtacctccca
atcgggaccccctcctcctcctcctcctcccccgccgccgctgctggggcccccgagccc
caaaccctacccttcttcctctccccgctcccgctcccacccccgcctctccccgcgggg
caccgcgtcctctcctcgctgcccccgcctcctccgcggtggccgatcgccgtccgcgtc
cctcccgccttcctcttcgaggcggatttccgccggagccactccctcgtccagttcttg
gagaacgagggggccgtcccgacggtggaggaggataagacgagggagcaggtcatccgc
aagctcaaggagattgtgatggattgggccaaggtggtggcctatgagcagagggtgccc
ccgaggcgggttacggctaccgtcttgacctacggttcttacacattaggggcacatggt
cctgaatccgacattgatgcgctctgtgttggtccctgtattgcaacattgcagcaccat
ttctttgttgctctgcggcaaattcttgagcgcaggctggaagtttcaggcatgcagacc
gtagaaaatgctaaggttccattgatgcggtttacattcagcgggatttcagttgattta
acatacgcccagctccctgttgttgatgcagttgaggctataaatacatctagtcctcag
tttctccggagacttgattcacggagctggagaagtttatctggggttcgcgttaatgaa
cagatcgtgcagctagttccaaatgcaaagaagttccaagttctgttgcggtccataaaa
ctgtgggctaggaggcgaggacttcattgccatttgctgggtttctttgctgggattcat
ttggcaattcttgcagcatatatttgtcagagatatccaaatgccactgccaatggtttg
ttcaccatgttttttgagatatttgctcactgggattggcaaattccagtaaacctgcat
ggtcagccaactaactgtaagcgctcagatgggtattacatgcccatagtgatgccttgt
actccaccggagctctgtatgtctaacatgacaaaatgtaccttcaagaagatcagagag
gagcttatgcgtggttatgctttgaccaaggacttgtggaggcatgattttgagtggaca
tggctttttgcacctttcccgtatgcgacaaggtatcaacaatttcttcgtattgctcta
tgttctccaacctctgaagaactacgtgattggactggatgggtcaaatcccgcttccgt
cagcttattctcaagctggaaagaaatggtctcgagtgtgacccatattcatcagaggaa
gttgatcatagagtcatcaagccaaacatcatgtatcactggggcctcatctctgaagca
aacacttaccttgatattagctctctgagagaagatttcatgaaagatatcatcaatgat
gtctatggcaaggtgaaatgcagacgctcggagctgacactgtccgtcgttggttcatcg
cagctgccaaaaagcatgtacagcgactcagcttaccttgggtacatgccacagtatatg
gtgggctaccagccagcacctgactgctggagtgcagctggctag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (20)   

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