KEGG   Bacteroides fragilis 638R: BF638R_0308
Entry
BF638R_0308       CDS       T01691                                 
Symbol
murD
Name
(GenBank) putative UDP-N-acetylmuramoylalanine--D-glutamate ligase
  KO
K01925  UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
Organism
bfg  Bacteroides fragilis 638R
Pathway
bfg00470  D-Amino acid metabolism
bfg00550  Peptidoglycan biosynthesis
bfg01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:bfg00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    BF638R_0308 (murD)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    BF638R_0308 (murD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:bfg01011]
    BF638R_0308 (murD)
Enzymes [BR:bfg01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.9  UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
     BF638R_0308 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:bfg01011]
 Precursor biosynthesis
  Amino acid ligase
   BF638R_0308 (murD)
SSDB
Motif
Pfam: Mur_ligase_M MurD_N MurD-like_N Mur_ligase_C AlaDh_PNT_C
Other DBs
NCBI-ProteinID: CBW20909
UniProt: E1WM66
Position
complement(332974..334308)
AA seq 444 aa
MKRIVVLGAGESGAGAAVLAKVKGFDTFVSDMSAIKDKYKTLLDGHGIAWEEGRHTEEQI
LSADEVVKSPGIPNDAPLILKLREQGTPIISEIEFAGRYTDAKMICITGSNGKTTTTSLI
YHIFKSAGLNVGLAGNIGKSLALQVAEEKHDYYVIELSSFQLDNMYNFRADIAVLMNITP
DHLDRYDHCMQNYINAKFRITQNQTSEDAFIFWNDDPIIKRELDKHGIRAHLYPFSAIKE
EGSIAYVEDHEVVITEPIAFNMEQEQLALTGQHNLYNSLAAGISANLAGITKEDIRKALS
DFQGVEHRLEKVARVRGIDFINDSKATNVNSCWYALQSMTTKTVLILGGKDKGNDYTEIE
ELVREKCSALVYLGLHNEKLHEFFDRLGLPVAEVQTGMKDAVEAAYKLAKKGETVLLSPC
CASFDLFKSYEDRGEQFKKYVREL
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgaaaagaattgtagtattaggagccggtgaaagcggtgcgggagcagccgttctggcc
aaagtaaaaggattcgatactttcgtatcggatatgtctgctatcaaggataagtataaa
actctccttgacggccatggcattgcctgggaagaaggccgacacacagaagaacagatt
ttgagtgctgacgaagttgtgaaaagccccggaattcctaatgacgccccactgattctg
aaattgagagaacagggcacacctatcatctcggaaatagaatttgccggcagatacacc
gatgccaaaatgatctgtatcaccggctcgaacggaaagacgaccacaacctcgcttatc
tatcacatttttaaaagcgcaggactaaatgtgggacttgccggaaacatcggtaaaagc
ctggcattgcaagtggccgaagagaaacatgattattatgtaatcgaattgagttcattc
cagttggataacatgtataacttccgtgccgatatcgctgtattgatgaacattacaccg
gaccatctggaccggtacgaccattgtatgcagaactatattaacgcaaagtttcgtatt
acgcagaatcagacttcggaagacgcgtttatcttctggaacgatgaccctatcatcaaa
cgtgaactggacaaacatggcattcgtgcccacctgtatccattctcggcaatcaaagaa
gaaggatctatcgcctatgtggaagaccatgaagtagtaattaccgaaccgatcgctttc
aatatggaacaggaacagttggccctgaccggccaacacaatctttataactctttagcc
gccggtatctccgccaaccttgccggtatcaccaaagaagatataaggaaagcgctcagt
gactttcagggggtagaacaccgcctggagaaggtggcacgcgtacgtggcattgatttt
atcaatgactccaaagcaacgaatgtaaactcttgctggtatgccttgcagagtatgact
actaaaacggtattgattctcggaggaaaagacaagggaaacgattatacggaaatagaa
gaactggtacgggagaaatgctcggcactggtctacctgggattgcacaacgaaaagctt
catgagtttttcgaccgtctcggactccctgtagccgaagtacagaccggcatgaaggat
gccgtagaagcagcttacaagctggcgaaaaagggagaaacagtattgttgagtccatgt
tgcgcctcctttgaccttttcaagagctatgaagaccgtggcgaacagtttaagaagtat
gtaagagaattataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (24)   

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