KEGG   Bacteroides fragilis 638R: BF638R_4014
Entry
BF638R_4014       CDS       T01691                                 
Symbol
rpoA
Name
(GenBank) putative DNA-directed RNA polymerase alpha chain
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
bfg  Bacteroides fragilis 638R
Pathway
bfg03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bfg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BF638R_4014 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bfg03021]
    BF638R_4014 (rpoA)
   03400 DNA repair and recombination proteins [BR:bfg03400]
    BF638R_4014 (rpoA)
Enzymes [BR:bfg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BF638R_4014 (rpoA)
Transcription machinery [BR:bfg03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BF638R_4014 (rpoA)
DNA repair and recombination proteins [BR:bfg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BF638R_4014 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD RNA_pol_L_2
Other DBs
NCBI-ProteinID: CBW24457
UniProt: E1WP08
Position
complement(4743751..4744743)
AA seq 330 aa
MAILAFQKPDKVLMLEADAKFGKFEFRPLEPGFGITVGNALRRILLSSLEGFAITTIRIE
GVEHEFSSVPGVKEDVTNIILNLKQVRFKQVVEEFESEKVSITIENSSEFKAGDIGKYLT
GFEVLNPELVICHLDSKATMQIDITINKGRGYVPADENREYCTDVNVIPIDSIYTPIRNV
KYAVENFRVEQKTDYEKLVLEITTDGSIHPKEALKEAAKILIYHFMLFSDEKITLESNDV
DGNEEFDEEVLHMRQLLKTKLVDMDLSVRALNCLKAADVETLGDLVQFNKTDLLKFRNFG
KKSLTELDDLLESLNLSFGTDISKYKLDKE
NT seq 993 nt   +upstreamnt  +downstreamnt
atggcgatattagcatttcaaaaacctgataaagtattaatgttggaagcggatgccaaa
ttcggtaaattcgaatttcgtcccttggaacccggttttggtattaccgttggtaatgct
ttgcgccgtatcctcctttcttcattagaaggttttgctatcaccactatccgtatagaa
ggtgttgagcacgaattttctagtgttcctggagtaaaagaggatgttaccaacattatc
ttgaatctgaaacaagtgagattcaagcaagtagttgaagaattcgagagcgaaaaggtg
agcatcactatcgagaattctagtgaatttaaagcaggtgacataggtaagtatttgact
ggatttgaagtgttaaatccggaattagttatttgtcatttagattctaaagcaactatg
cagattgacattacaattaacaaaggtcgtggatatgtccccgctgacgaaaaccgcgaa
tattgtaccgatgttaatgtaattccaatcgattcaatctatacgccgatacgtaatgtt
aagtatgctgtagaaaacttccgtgtagagcagaagactgactacgagaaactggtactt
gaaattactaccgacggttccattcacccgaaagaagcgctgaaagaagctgctaaaatt
ctgatttatcactttatgttattctctgacgaaaaaattactcttgaaagtaatgacgtt
gacggtaatgaagagtttgatgaagaagtattgcatatgcgtcagctgttgaaaactaaa
cttgtcgatatggatctgtcagtacgtgccctcaattgcttgaaggctgctgatgttgaa
acattgggcgatttggtacagttcaacaaaactgacctgctgaaattcagaaacttcgga
aagaaatcgcttaccgagcttgatgatttgctggaaagtctgaatctgtcgtttggaacc
gatatttctaaatataaattagataaagaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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