KEGG   Brevibacillus formosus: BP422_04515
Entry
BP422_04515       CDS       T04939                                 
Name
(GenBank) Holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
bfm  Brevibacillus formosus
Pathway
bfm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bfm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BP422_04515
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bfm03400]
    BP422_04515
Enzymes [BR:bfm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BP422_04515
DNA repair and recombination proteins [BR:bfm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BP422_04515
    RecFOR pathway proteins
     BP422_04515
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 Mg_chelatase TIP49 AAA_16 AAA_22 AAA_14 nSTAND3 RNA_helicase NTPase_1 TsaE AAA_18 NB-ARC Sigma54_activ_2 Rad17 AAA_3 MCM AAA_17 Resolvase Bac_DnaA AAA_24 AAA_28 DUF815 bpMoxR AAA_19 NACHT AAA_33 IstB_IS21 AAA_13
Other DBs
NCBI-ProteinID: ASJ52882
UniProt: A0A220MD25
Position
932465..933463
AA seq 332 aa
MDSRIITTHMNWEEDAAELSLRPRYLNEYIGQQHVKENLKIFIEAAKMRKESLDHVLLYG
PPGLGKTTLSQIIANELGVNIRTTSGPAIERPGDLAAILTNLQEGDVLFIDEIHRLNRSV
EEVLYPAMEDFALDIIIGKGPSARSVRLDLPPFTLVGATTRAGMLSAPLRDRFGVVNRLE
FYTVPELTFIVSRAADILQVVIREGGAEEIARRSRGTPRVSNRLLKRVRDFAQVKGEGVI
TTEIAKEALERLQVDACGLDHIDHKLLLAIIDRFDGGPVGLDTIAATIGEESQTVEDVCE
PYLMQIGFMQRTPRGRVLTPSAYQHFGREMKS
NT seq 999 nt   +upstreamnt  +downstreamnt
ttggattctcggatcatcacgacgcatatgaattgggaagaagatgcggcggagctgagc
ctccgtcctcgctatttaaacgaatacatcggccagcagcatgtgaaggaaaacttgaaa
atctttattgaagcggccaaaatgcggaaagagtcgttggaccacgtactgctgtacggt
ccgcctggtctggggaagacgactctgtcgcaaattattgccaatgagctgggtgtgaat
atccgtacgacgtccggtccggcaattgagcgtccaggtgatttggcagcgattttgacg
aatttgcaagaaggcgatgtcctgtttattgacgagattcacaggctcaaccgaagcgtc
gaggaagttttgtatccggctatggaggattttgcgctggacatcattattggtaaaggg
ccaagtgctcgcagtgtccgtttggatttgccgccatttacactggtcggggctacgacg
cgggctggaatgctgtccgcgccgcttcgagatcgctttggggttgttaatcgcctagag
ttttatacagtcccggaactgacctttatcgtttcacgggcagccgacatcctgcaggtc
gtcattcgagaaggcggagcagaggagattgccagacgttcacgtggaacaccccgggtg
tcaaaccgtttgctgaagcgggtccgcgattttgcccaagtaaaaggcgaaggtgtcatt
acgacagaaattgccaaagaagcgctggaaagattgcaagtggatgcttgtggtctcgat
catatcgaccacaaactgttgctagcaattattgatcgctttgacggtggaccggttgga
ctggatacgatcgcagcaacaatcggagaagagtcacaaacggtggaagatgtttgcgag
ccatacctcatgcagattggctttatgcagcggacgccgcgggggcgggttcttaccccg
agtgcgtaccaacactttggtcgggagatgaaatcgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (32)   
   Pfam (32)   
All databases (42)   

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