KEGG   Paraburkholderia fungorum: OI25_1364
Entry
OI25_1364         CDS       T03799                                 
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
bfn  Paraburkholderia fungorum
Pathway
bfn03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bfn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    OI25_1364 (xth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bfn03400]
    OI25_1364 (xth)
Enzymes [BR:bfn01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     OI25_1364 (xth)
DNA repair and recombination proteins [BR:bfn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     OI25_1364 (xth)
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2
Other DBs
NCBI-ProteinID: AJZ58132
UniProt: A0A0D5V835
Position
1:complement(1550183..1550962)
AA seq 259 aa
MLRVITANLNGIRSAAKKGFFDWFGEQKADVLCVQEIKCSQDDLTPEFMSPHGFTGYFQH
AVKKGYSGAGVYTRHEPDEVVIGFGSEEFDPEGRYVELRFGKLSVISVYVPSGSSGDERQ
QAKFRFMDEFMPHLAELAQEREVIVCGDVNIVHKEIDIKNWKSNQKNSGCLPEEREWLTK
LFDEVGYVDVFRTLDQRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGIAGKAKRTEVFRD
IKFSDHAPLTVDYDHKVKK
NT seq 780 nt   +upstreamnt  +downstreamnt
atgttgcgtgtgattaccgccaacctgaacggcatccgctcagcggcaaagaagggtttt
ttcgattggttcggcgaacagaaagccgatgtgctgtgcgtgcaggaaatcaaatgttcg
caagacgatctgacgccggagttcatgtcgccgcacggtttcaccggttatttccagcac
gcggtgaagaaaggttatagcggcgcgggcgtgtacacgcgacatgagccggatgaagtg
gtgatcggcttcggcagcgaggaattcgatccggaagggcgctatgtcgaattgcgtttc
ggcaaactgtcggtgatctcggtgtacgtgccgtcgggatcgagtggtgacgaacgtcag
caggccaagttccgcttcatggacgagttcatgccgcatctcgccgagttggcccaggaa
cgggaagtgatcgtgtgcggcgacgtgaacatcgtccacaaagagatcgacatcaagaac
tggaagagcaaccagaagaattcaggttgcctgccggaagagcgcgagtggttgactaag
ctgtttgacgaagtgggctacgtcgacgtgttccgcacgctcgaccagcggcccgagcaa
tacacgtggtggagtaaccgcggtcaggcgtatgcgaagaacgtggggtggcggatcgat
tatcagatcgccacgccgggcatcgccggcaaggcgaaacgcaccgaagtgttccgcgat
attaaattcagcgaccacgcgccgctgacagtcgattacgatcacaaggtcaagaagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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