KEGG   Bacteroides fragilis NCTC 9343: BF9343_0023
Entry
BF9343_0023       CDS       T00239                                 
Symbol
pdhD
Name
(GenBank) putative dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
bfs  Bacteroides fragilis NCTC 9343
Pathway
bfs00010  Glycolysis / Gluconeogenesis
bfs00020  Citrate cycle (TCA cycle)
bfs00260  Glycine, serine and threonine metabolism
bfs00280  Valine, leucine and isoleucine degradation
bfs00310  Lysine degradation
bfs00380  Tryptophan metabolism
bfs00620  Pyruvate metabolism
bfs00630  Glyoxylate and dicarboxylate metabolism
bfs00640  Propanoate metabolism
bfs00785  Lipoic acid metabolism
bfs01100  Metabolic pathways
bfs01110  Biosynthesis of secondary metabolites
bfs01120  Microbial metabolism in diverse environments
bfs01200  Carbon metabolism
bfs01210  2-Oxocarboxylic acid metabolism
bfs01240  Biosynthesis of cofactors
Module
bfs_M00009  Citrate cycle (TCA cycle, Krebs cycle)
bfs_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bfs_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
bfs_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:bfs00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    BF9343_0023 (pdhD)
   00020 Citrate cycle (TCA cycle)
    BF9343_0023 (pdhD)
   00620 Pyruvate metabolism
    BF9343_0023 (pdhD)
   00630 Glyoxylate and dicarboxylate metabolism
    BF9343_0023 (pdhD)
   00640 Propanoate metabolism
    BF9343_0023 (pdhD)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    BF9343_0023 (pdhD)
   00280 Valine, leucine and isoleucine degradation
    BF9343_0023 (pdhD)
   00310 Lysine degradation
    BF9343_0023 (pdhD)
   00380 Tryptophan metabolism
    BF9343_0023 (pdhD)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    BF9343_0023 (pdhD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bfs04147]
    BF9343_0023 (pdhD)
Enzymes [BR:bfs01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     BF9343_0023 (pdhD)
Exosome [BR:bfs04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   BF9343_0023 (pdhD)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 NAD_binding_8 DAO FAD_binding_3 HI0933_like FAD_oxidored GIDA AlaDh_PNT_C FAD_binding_2 Thi4 Trp_halogenase 3HCDH_N Lycopene_cycl 2-Hacid_dh_C Lys_Orn_oxgnase NAD_binding_9
Other DBs
NCBI-ProteinID: CAH05802
UniProt: Q5LJ74
Position
27843..29186
AA seq 447 aa
MKYQVIIIGGGPAGYTAAEAAGKAGLSVLLFEKQNLGGVCLNEGCIPTKTLLYSAKTYDG
AKHASKYAVTVPEVFFDLPKIIARKSKVVRKLVLGVKSKLTSNNVTIISGEATILDKNTV
RCGEETYECDNLILCTGSETFIPPIPGIDSVNYWTHREALDNKELPASLAIVGGGVIGME
FASFFNSLGVKVTVIEMMDEILGGMDKELSALLRADYAKRGIQFLLSTKVVSLAQTEEGA
VVSYENAEGAGSVIAEKLLMSVGRRPVTKGFGLENLNLQRTERGSIVVNGQMESSLPGVY
VCGDLTGFSLLAHTAVREAEVAVHAILGKEDRMSYAAIPGVVYTNPEIAGVGQTEESLTA
KGIAYRAVKLPMAYSGRFVAENEGVNGVCKVLLGEDDTILGAHVLGNPASEIITLAGMAV
EMKLKAAEWKKIVFPHPTVAEIFREAL
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgaaataccaggttattattatcggtggagggcctgccggctatacggctgctgaggct
gccgggaaagcaggactgagtgtgttgctttttgagaaacaaaatttaggaggtgtttgt
ctgaacgaagggtgtatcccgacaaaaacgttactctattcggctaaaacctatgatggt
gctaaacatgcgtcaaaatatgctgtaacggttccagaggtcttttttgatcttcctaag
atcattgctcgtaaatcgaaggtggtacgtaaactggttttaggggtaaaatcgaagtta
acgtccaataatgttactattataagtggagaggcaaccattttggacaagaatacggtt
cgttgcggtgaagaaacttatgaatgtgataacttaattctctgtacaggttccgaaact
tttattcctcctattcccggaatcgatagtgtaaactattggacacatcgtgaagcgtta
gacaataaggagttgccggcttcacttgccattgtgggcggtggagtgatcggtatggag
tttgcgtcctttttcaatagtctgggtgtgaaggtgaccgttattgagatgatggatgaa
attctgggaggcatggataaagagctttccgccctgttgcgtgccgactatgcaaagcgg
ggcattcagttcctgttaagtaccaaagtcgtttcattggcacagacggaagaaggtgct
gtggtttcttatgaaaacgccgaaggggcaggaagcgtgattgccgaaaagctattaatg
agtgtgggacgtcgtccggtgacaaaaggctttgggcttgagaaccttaacctgcaacgg
acagaacgtggaagtattgtagtgaacgggcaaatggaaagctcgttacccggagtctat
gtttgcggtgatttaaccggattctccttattggcacatactgctgtccgtgaagcagaa
gtagccgtacatgcaattcttggaaaagaagataggatgagttatgccgctatccccggg
gtagtttatactaatcctgaaatagccggtgtcgggcagacagaagaatctctgactgca
aaaggcattgcttaccgtgccgtaaaacttcccatggcatattccggacgttttgttgct
gagaatgaaggagtgaatggagtatgtaaggtgctgcttggcgaggatgatactattttg
ggagcacatgttttgggtaatcctgcttctgagattatcacgttggcagggatggctgta
gaaatgaaactgaaggcagccgagtggaagaagattgttttcccacatcctacggttgcc
gagattttccgtgaagcattataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (23)   
   KEGG PATHWAY (16)   
   KEGG MODULE (7)   
Chemical substance (27)   
   KEGG COMPOUND (27)   
Chemical reaction (11)   
   KEGG ENZYME (1)   
   KEGG REACTION (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (19)   
   Pfam (19)   
All databases (88)   

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