KEGG   Paraburkholderia atlantica CCGE1002: BC1002_5209
Entry
BC1002_5209       CDS       T01217                                 
Name
(GenBank) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
bge  Paraburkholderia atlantica CCGE1002
Brite
KEGG Orthology (KO) [BR:bge00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bge03016]
    BC1002_5209
Enzymes [BR:bge01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     BC1002_5209
Transfer RNA biogenesis [BR:bge03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    BC1002_5209
 Prokaryotic type
    BC1002_5209
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-ProteinID: ADG19149
UniProt: D5WEM4
Position
2:2165513..2166325
AA seq 270 aa
MKRIALGVQYDGAAFAGWQSQPHGNTVQDELERALREFTRTPVQTVVAGRTDRGVHGLGQ
VVHFDTELDRVDISWVRGPNAFLPKTIGVQWAKPMPDDFHARFSAFERTYYYVLYVSPVR
SPMLTTRAGWVHTPLDVDAMRSAAEHLIGEHDFSAFRSSQCQSKTPFKHLYRIDVKRQGN
FVHFRFRANAFLHHMVRNVMGCLIEIGSGRRPAAWMADVLASRSRDCAAPTFMPDGLYLA
QVGYPEQFGVPDPATGSVPWSSIWTEQPET
NT seq 813 nt   +upstreamnt  +downstreamnt
gtgaagcgcatcgcactaggcgtgcagtacgacggcgccgcgttcgctggatggcagtcg
cagccgcatggcaacacggttcaggacgagctcgaacgggcgctgcgcgaattcacccgc
acgcccgtgcagacggtggtcgccggccgcactgaccgcggcgtgcatggcttggggcag
gtcgtgcatttcgacaccgaactcgaccgcgtcgacatttcctgggtgcgcggcccgaac
gcgtttctgccgaagacaatcggcgtgcaatgggccaagccgatgcccgacgattttcac
gcgcggttttcggcattcgagcggacctattactacgtgctgtacgtgagtccggttcgc
tcgccgatgctcacgacgcgcgccggctgggtgcacacgccactcgacgtcgacgcgatg
cgctcggccgccgagcacctgatcggcgagcacgacttttcggcgtttcgttcgtcgcaa
tgccagtcgaagacgccgttcaagcacctgtaccggatcgacgtcaaacgacaaggtaac
ttcgtgcatttccgcttccgcgcgaacgcgttcctgcatcacatggtgcgcaacgtgatg
ggttgcctgatcgaaatcggcagcggccgccgcccggccgcgtggatggccgacgtgctc
gcgagccgtagccgcgactgcgcggcgccgaccttcatgcccgacggcctgtatctcgcg
caagtgggctatcctgagcaattcggcgtgcccgatccggcgacgggcagcgtgccgtgg
agcagcatatggaccgagcaaccagaaacatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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