KEGG   Brachybacterium ginsengisoli: CFK41_10070
Entry
CFK41_10070       CDS       T05099                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
bgg  Brachybacterium ginsengisoli
Brite
KEGG Orthology (KO) [BR:bgg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bgg03016]
    CFK41_10070
Enzymes [BR:bgg01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     CFK41_10070
Transfer RNA biogenesis [BR:bgg03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    CFK41_10070
SSDB
Motif
Pfam: DNA_pol_A_exo1 DNA_pol_A_exoN HRDC
Other DBs
NCBI-ProteinID: ATG55069
UniProt: A0A291GXX1
Position
2260901..2262100
AA seq 399 aa
MTDTPAVTDLTAPRDGLVPVIDRIQPLLAWCERAASAPEEAVAVDAERASSYRYSSRAYL
VQLRTEAAGTALIDPLAFTLPGTLKSLLAEREWVLHAAGQDLPSLAELDLRPGTLFDTEL
AARLLGMERVGLGAVVEDTLGLHLAKEHSAADWSKRPLPEGWLTYAALDVEVLVEVRDVL
QERLQEAGKEDWALQEFEHERAREHGPTRSSSWRGLHGLGALRSVRQLAAAREMWTRRDE
IAGSQDLSPHRVIKDRDLVAAAKEAPRGREAFDRALPSKLRRKDVWWQAARTGLDLPPAH
LPERNERSYPPPHKLWSKKYPEVAERYQLVRAAAGQRAEDLEMPPENLLQPAVLREWVWE
HEQVPAESEIADQLTALGARPWQVEQAAPVIHRALTEQD
NT seq 1200 nt   +upstreamnt  +downstreamnt
gtgacagatacccccgccgtcaccgatctcacggcgccgcgcgacggcctggtgccggtc
atcgatcggatccagccgctgctggcctggtgcgagcgcgcggcctcagctcccgaggag
gccgtggccgtcgatgccgagcgcgcctcgagctaccgctacagctcccgcgcctacctg
gtgcagctgcgcaccgaggccgccgggaccgccctcatcgatccgctcgccttcaccctg
cccggcacgctgaagtccctgctcgcggagcgcgagtgggtgctgcacgccgccggtcag
gacctgcccagcctcgcggagctcgacctgcgccccggcacgctgttcgacaccgagctc
gccgcccggctgctggggatggagcgggtgggtctcggcgcggtcgtcgaggacaccctc
ggcctgcacctggccaaggagcactccgccgccgactggtcgaagcgccccctgccagag
gggtggctgacctacgcggcgctggatgtcgaggtcctggtcgaggtccgcgacgtgctg
caggagcggctgcaggaggccggcaaggaggactgggcgctccaggagttcgagcacgag
cgcgcccgcgagcacggccccacgaggtcctcgagctggcgcggcctgcacggcctgggc
gcgctgcgctcggtccgccagctcgccgcggcgcgcgagatgtggacccgccgcgacgag
atcgccgggagccaggatctctccccgcaccgcgtgatcaaggatcgcgacctggtggcc
gccgcgaaggaggctccgcggggccgtgaggcgttcgaccgggccctcccgtcgaagctc
cgtcggaaggacgtgtggtggcaggccgcccgcaccggcctggatctgccgcccgcgcat
ctgcccgagcgcaacgaacgctcctatcccccgccccacaagctctggtcgaagaagtac
cccgaggtcgccgagcggtaccagctggtgcgagccgcggccggccagcgcgccgaggac
ctcgagatgccgccggagaacctgctgcagccggcagtgctgcgcgagtgggtgtgggag
cacgagcaggtcccggcggagtccgagatcgccgaccagctgaccgcgctcggcgcccgc
ccctggcaggtcgagcaggccgcgccggtcatccaccgggccctgaccgaacaggactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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