KEGG T04820: BGM20

Alkalicoccobacillus gibsonii: BGM20_21115

Entry

BGM20_21115       CDS       T04820

Name

(GenBank) RNA pseudouridine synthase

K06180

23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]

Organism

bgi Alkalicoccobacillus gibsonii

Brite

KEGG Orthology (KO) [BR:bgi00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bgi03009]
    BGM20_21115
Enzymes [BR:bgi01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     BGM20_21115
Ribosome biogenesis [BR:bgi03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    BGM20_21115

SSDB

Motif

Pfam:

PseudoU_synth_2 WYL_3

Other DBs

NCBI-ProteinID:

AOL32932

Position

4091202..4092101

AA seq 299 aa
MEHFFIRKNITSAEDGMTVKEYAGELGISKRLLTDIKFGGGDLQINGEHVTVKYVLKEGD
LLIVKFPEEQVSETLLAEPVPLDILYEDEHVLVINKQPYVSSIPSREHPSGSIANGIIDH
YQTTGVRATVHLVTRLDRDTSGIMLVAKHRFAHSILSSAQKNGLVKRRYAAVVHGRMAQM
EGTVDAPIGRHPDSIIERTVTPDGQKAVTHFYVTCANDDMTSVALQLETGRTHQIRVHMS
YLGHPLCGDTLYGGTRQEIGRQALHSEHLSFIHPLTQENMRFHAPLPQDMSKLIKGENH

NT seq 900 nt +upstreamnt +downstreamnt
gtggagcatttttttatcagaaagaacattacttccgctgaggacgggatgactgtaaaa
gaatatgccggtgaactgggaatttcgaaacgtctgctgaccgatattaagtttggcggg
ggagacctgcagattaacggtgagcatgtgacggtcaaatacgttttgaaagagggagat
cttcttatcgtgaagtttcctgaggagcaggtgagcgagacgctgttggcagagcctgtt
ccgctcgatatcctttatgaggatgaacatgtgcttgtgataaacaagcagccgtatgtg
tcatcaatcccttcgagagagcacccctccggcagcattgccaatggaattattgatcat
tatcaaacaaccggagtgagggcgacagttcatcttgtcacccggttagaccgggataca
tcaggtatcatgcttgttgccaagcatcgatttgcccactccattttatcgtctgcgcaa
aaaaacggccttgtgaaacgccggtatgcggcagtggttcacgggcggatggcacagatg
gagggaacagtcgatgctccgattggcagacatcctgacagtattattgaacggacggta
acgccagacggccagaaggctgttactcatttttacgtcacatgtgcaaatgatgacatg
acctcggtggcattgcagcttgagactggacgaacccatcaaattcgtgttcatatgagc
tatctcgggcacccgttgtgcggcgatacactgtacggcggaacgagacaggaaattggc
cggcaggctctgcacagcgagcatctttcgtttatccatccgctgacacaggagaacatg
aggtttcatgctccactgcctcaggacatgagcaaactgataaaaggagagaatcattga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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