KEGG   Brenneria goodwinii: AWC36_20005
Entry
AWC36_20005       CDS       T05061                                 
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
bgj  Brenneria goodwinii
Pathway
bgj03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bgj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AWC36_20005
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bgj03019]
    AWC36_20005
Enzymes [BR:bgj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     AWC36_20005
Messenger RNA biogenesis [BR:bgj03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     AWC36_20005
SSDB
Motif
Pfam: DEAD Helicase_C ResIII ERCC3_RAD25_C CCDC138_C AAA_22
Other DBs
NCBI-ProteinID: ATA26211
UniProt: A0A0G4JU29
Position
complement(4584753..4586042)
AA seq 429 aa
MSKTHLTEQKFSDFALHPQVIEALESKGFHNCTPIQALTLPLVLSGRDIAGQAQTGTGKT
LAFLASTFHYLLSHPASAERQVNQPRALIMAPTRELAVQIHSDAEALSRLTGLKLGLAYG
GDGYDKQLKVLESGVDILVGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPPVTQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLLEEEWPDRCIIFANTKHRCEDVWGHLAADGHRVGLLTGDVAQKKRLRILD
DFTHGNLDILVATDVAARGLHIPSVTHVFNYDLPDDCEDYVHRIGRTGRAGESGFSISLA
CEEYALNLPAIETYIGHHIPVSKYNSDALLNDLPAPKRLTRPPRSNNSTRRHNTPRRSGA
PRTNRKRQG
NT seq 1290 nt   +upstreamnt  +downstreamnt
atgagcaaaacacacttaactgaacagaagttttccgacttcgccctgcacccgcaggtt
atagaagcccttgaaagtaaaggatttcataactgtacgcctattcaggcgttaacactg
cccctggttttgtcagggcgggatatagcaggtcaggcgcaaaccggtactggcaagacg
ctggcttttctcgcgtctactttccattatttgctttcacaccctgccagcgcagagcgt
caggtcaatcaacctcgcgcgttaatcatggcgcccacccgtgaattagccgtgcagatt
cactccgatgcggaagcgctttcccgcctgacgggtttaaaactcggcctggcctacggc
ggcgatggttatgacaaacagctcaaggtgctggaaagcggcgtcgatattctggtcggc
accacaggccgtctgatcgactacgccaagcaaaaccacattaatctgggcgcgatccag
gttgtggtgctggatgaggccgatcgcatgtacgatctcggctttatcaaagatattcgc
tggctgttccgccgcatgccgccggtaacgcagcgcctgaatatgctcttttccgccacg
ctttcctatcgcgtacgcgagcttgcctttgagcaaatgaataatgcggagtacgtggag
gtcgaaccggaacaaaaaaccggacaccgtattaaagaagagctgttttatccctctaat
gaagaaaaaatgcgcctgttacagacactgcttgaggaagagtggcccgatcgctgcatt
attttcgccaataccaaacaccgttgtgaagacgtctggggtcatttagccgctgacggc
catcgcgtcggcctgttaaccggcgacgtggcgcagaagaaacgtctgcgcattctggat
gatttcacccacggcaatctggacattctggtggcgacggacgtcgcggcgcgcggcctg
catattccatccgtcactcacgtattcaactacgacctgccggacgattgcgaagactat
gtccaccgtatcggccgtaccggccgcgcgggcgaaagcggtttctccatcagcctcgcc
tgcgaggagtatgcgctgaacttaccggccatcgagacctatatcggccaccatattccg
gtcagtaaatacaatagcgatgctctgcttaacgatttaccggcaccaaaacgtttaacg
cgcccgcctcgctccaataacagcacgcgcaggcataatacgccgcgccgcagcggagcg
ccgcgcactaatcgtaaacggcagggttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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