KEGG   Bacteroides helcogenes: Bache_0194
Entry
Bache_0194        CDS       T01393                                 
Name
(GenBank) ATP-dependent DNA helicase RecQ
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
bhl  Bacteroides helcogenes
Pathway
bhl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bhl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Bache_0194
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bhl03019]
    Bache_0194
   03400 DNA repair and recombination proteins [BR:bhl03400]
    Bache_0194
Enzymes [BR:bhl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Bache_0194
Messenger RNA biogenesis [BR:bhl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     Bache_0194
DNA repair and recombination proteins [BR:bhl03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Bache_0194
SSDB
Motif
Pfam: RecQ-1-like_HTH RQC DEAD Helicase_C HRDC RecQ_Zn_bind ResIII HHH HTH_40 Helicase_Sgs1 zf-CXXC
Other DBs
NCBI-ProteinID: ADV42224
UniProt: E6ST93
Position
complement(263750..265933)
AA seq 727 aa
MAGKKTNLTDQLKEYFGFDTFKGNQEAIIQNLLDGNDTFVLMPTGGGKSLCYQLPSLLME
GTGIVISPLIALMKNQVDAMRNFSEEDGIAHFINSSLNKGAIDQVKSDIVSGKTKLLYVA
PESLTKEENVEFLKTVKISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKAPLIALTA
TATPKVQHDIQKNLGMVDARVFKSSFNRPNLYYEVRPKTANVDRDIIKFIKNNSEKSGII
YCLSRKKVEELAEILQANGINARAYHAGMDSATRTQNQDDFLMEKIDVIVATIAFGMGID
KPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAEQE
IGKQLLLETAAYAESSVCRRKTLLHYFGEEYTEENCGNCDNCLNPKKQVEAQELLCTVIE
AILAVKENFKADYIIDIIQGKETSEVQAHLHEELEVFGSGMGEEDKTWNAVIRQALIAGY
LSKDVENYGLLKVTDEGKKFLKHPKSFKIVEDNDFEEVEEEAPARGGGACAVDPALYSML
KDLRKKLSKKLEVPPYVIFQDPSLEAMATIYPVTLDELQNIPGVGAGKAKRYGEEFCKLI
KRHCEENEIERPEDLRVRTVANKSKMKVAIIQAIDRKVALDDIAMSKGIEFEELLDEIEA
IVYSGTKLNIDYFLEDIMDEDHMLDIYDYFKESTTDKIDDALDELGDDFTEEEVRLVRIK
FISEMAN
NT seq 2184 nt   +upstreamnt  +downstreamnt
atggcagggaagaaaaccaatttgacagaccagttgaaggaatacttcgggttcgacaca
tttaagggaaatcaggaagcaataatccagaacctgctggatgggaacgatacttttgtg
ttgatgcccaccggtggaggtaaatcattgtgctatcaattaccctccttattaatggaa
ggtacaggaattgtgatttcaccgttgattgccctgatgaagaaccaggtcgatgcgatg
cgcaacttcagcgaggaagatggcattgctcattttattaattcttctctgaataaggga
gcgatagatcaagtgaaatccgatattgttagtggtaagaccaagttgttgtatgtagct
cccgaatcgttgacgaaagaagagaacgttgagtttctgaagacggtaaagatttctttc
tatgccgtggatgaggcgcattgtatctcagagtgggggcatgacttccgtccggaatat
cgtcgcattcgtcctattattaatgaaatcggaaaagctccgcttatagcgttgactgcg
actgccacacccaaagtgcagcatgatattcagaaaaatctgggtatggtggatgcgcgg
gtattcaagtcgtcattcaaccgtccaaacctatactatgaggtacggcccaaaaccgct
aatgtggatagggatatcatcaagtttattaagaacaattctgaaaagtcaggtattatt
tactgtctgagtcggaagaaagtagaagaacttgctgaaatcttgcaggctaacggcatc
aatgcccgtgcatatcatgccggaatggactcggctacacgaacgcagaatcaggatgat
ttcttgatggaaaagatagatgtgattgtggctaccattgcttttggtatgggcattgac
aagccggatgtacgctatgtgatccattatgatattccgaaaagtcttgaaggatattat
caggaaaccggacgtgccggtagagatgggggagaaggacagtgcattactttttatacg
aacaaggacttgcagaaacttgaaaagttcatgcaaggcaagcctgtagcagagcaggaa
ataggcaagcagcttctgttggagacggctgcgtatgccgaatcttccgtatgccgtcga
aagacattgcttcattacttcggtgaagaatatacggaggagaattgtggtaattgtgac
aactgtttaaatccaaaaaaacaagtggaagctcaggaattattgtgtaccgttattgag
gcgatcctcgcggtgaaagaaaattttaaagcggactatattatagacataatacaaggt
aaggagacttcggaagtgcaggctcacctgcacgaagagctcgaagtgttcggttccggt
atgggggaagaagacaaaacgtggaatgccgttatccgtcaggctcttatagctggatat
ttaagcaaggatgtcgaaaattatggtttgctgaaagttacggatgaaggtaagaaattt
ctcaagcatcccaagtccttcaaaattgtggaagacaatgattttgaggaggtagaagag
gaagctccggcacgcggaggcggtgcttgtgcggttgatcccgcattatactccatgctg
aaagatctacgtaaaaaactgtccaaaaaactggaagttcctccttacgttatatttcag
gatccttctctggaagcaatggcaactatttatcctgtgacattggatgagttgcagaat
attccgggggtcggagcaggcaaggcgaaacgttacggtgaagaattctgcaagctaata
aagcgccactgcgaagaaaatgagattgaacggccggaagacttgcgtgtacgtaccgta
gccaataaatcaaagatgaaagtagccattatacaggctatcgatcgtaaagtcgcattg
gatgatattgctatgtcaaagggcattgaatttgaggagttgctggatgagatagaagcg
attgtttattcaggaaccaaactgaatattgattattttctggaagacattatggatgaa
gatcacatgctggacatctatgattattttaaggaatccacaacggataagattgatgat
gctctggatgaattaggtgatgattttacggaagaagaagtgcgtttggtacgtattaag
ttcatctcagaaatggcaaactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (22)   

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