KEGG   Bacteroides helcogenes: Bache_2297
Entry
Bache_2297        CDS       T01393                                 
Name
(GenBank) DNA ligase, NAD-dependent
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
bhl  Bacteroides helcogenes
Pathway
bhl03030  DNA replication
bhl03410  Base excision repair
bhl03420  Nucleotide excision repair
bhl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bhl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Bache_2297
   03410 Base excision repair
    Bache_2297
   03420 Nucleotide excision repair
    Bache_2297
   03430 Mismatch repair
    Bache_2297
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bhl03032]
    Bache_2297
   03400 DNA repair and recombination proteins [BR:bhl03400]
    Bache_2297
Enzymes [BR:bhl01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     Bache_2297
DNA replication proteins [BR:bhl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     Bache_2297
DNA repair and recombination proteins [BR:bhl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     Bache_2297
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Bache_2297
   MMR (mismatch excision repair)
    DNA ligase
     Bache_2297
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Bache_2297
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT DNA_ligase_ZBD PTCB-BRCT Auto_anti-p27 BRCT_2
Other DBs
NCBI-ProteinID: ADV44265
UniProt: E6STL8
Position
complement(2801404..2803401)
AA seq 665 aa
MTAKEKIDQLRADLHRHNYNYYVLNAPEISDKEFDSMMRDLQNLEKEYPEYQDNSSPTMR
VGSDLNKNFTQVMHKYPMLSLGNTYSENEVTDFYDRVKQSLNEDFEICCELKYDGTSISL
TYENGKLVRAVTRGDGEKGDDVTDNVKTIRTIPLLLHGNYPKLFEIRGEILMPWKSFEAL
NNEREAREETLFANPRNAASGTLKLQNSAVVASRKLDAYLYYLLGEELPCNGHYENLQMA
ASWGFKISEHMKKVHSLEEIFEYISFWDTERKNLSVATDGIVLKVNSLKQQKNLGFTAKS
PRWAIAYKFQAERALTRLNKVTYQVGRTGTITPVANLDPVQLSGTVVKRASLHNADIIEG
LDLHIGDMVYVEKGGEIIPKITGVNKEARGMLLGEKVKFITHCPECGSRLIRYEGEAAHY
CPNETACPPQIKGKIEHFICRKAMDIDGLGPETVDTFYRLGLIKDAADLYNLKADDIKGL
DRMGEKSAENIINGITASKEVPFERVLFALGIRFVGETVAKRIAKSFIDIEELANANLEV
LINIDEIGEKIAKSIVTYFCNPSNRKLVERLKDAGLQLFQKEEDLNEYTDRLAGQSIVIS
GVFTHHSRDEYKILIEKNGGKNTGSISAKTNFILAGENMGPAKLEKARKLGIKIMNEDEF
LALIS
NT seq 1998 nt   +upstreamnt  +downstreamnt
atgactgctaaagaaaagatagaccaacttcgtgccgatctgcatcggcataactacaat
tattatgtattaaatgctcctgaaatatctgacaaggaatttgatagtatgatgcgtgat
ctccaaaacttggaaaaggagtaccctgaatatcaggataacagttctccgacaatgcgt
gtaggaagtgatttgaataaaaactttacgcaagtaatgcacaaatatccgatgctttca
ttaggaaatacttattctgaaaatgaagtgacagatttctatgaccgagttaaacagtct
ctaaacgaggattttgaaatttgttgcgaactgaaatatgatggaacctcaatctcttta
acttatgaaaatggcaaattggtacgtgccgtcactcgaggagatggtgagaaaggtgat
gacgttacagacaatgtaaaaaccatccgtaccataccacttttacttcatggaaattat
cctaaattatttgagattagaggagaaatattaatgccttggaagtcatttgaagctctg
aacaatgaaagggaagcaagagaagagactttgtttgccaatcctcgtaatgcggcgtca
ggtacattgaagttacaaaattcggctgttgttgcatctcgcaaattagatgcttattta
tattacttattaggagaagaattgccttgtaatggacattatgagaatttacaaatggca
gccagttggggattcaaaatatcggagcatatgaaaaaagtgcatagcctggaggaaata
ttcgaatatatcagcttttgggataccgaacgtaaaaacctatcagtagcaacagatggc
attgttttaaaagtaaacagcttgaaacaacagaaaaatcttggttttactgcaaaatct
cctcgttgggccattgcatataaatttcaggctgaacgtgcattgactcgtctgaacaaa
gtaacctatcaagtggggcgtactggtacaatcactcctgttgccaatctggatccagta
caactatcaggaacagtggtaaaaagagcctctttacacaatgcagacatcatcgaaggc
ttggatcttcacatcggagatatggtttatgtggaaaaaggaggagaaattatacctaaa
atcactggcgtaaataaagaggcacgaggcatgctacttggagaaaaagtgaaatttatt
actcattgccctgaatgtggcagcagattaatacgctatgagggtgaagcagcgcattat
tgtcctaatgagacagcttgccctccacaaataaaaggcaaaatagagcatttcatctgc
cgtaaagcaatggatatagacggactggggccagagactgtagatactttctatcggtta
ggtttgataaaggatgctgcagacttatataatctcaaagcagatgatattaaaggcttg
gatcgcatgggagagaagtctgcggaaaatattataaatgggattacagcgagtaaagag
gttccttttgaacgagtattgtttgcattgggcattcgctttgtaggagaaaccgtagcc
aagagaatagctaaatcattcatagatatagaagaacttgccaatgccaatcttgaggtt
ctaataaatattgatgaaattggtgaaaaaatagcgaaaagcattgtaacttatttctgc
aatccatcgaaccgtaaactggtggaacgactgaaagatgccggattacaactctttcaa
aaagaagaagatttaaatgaatataccgataggttagcaggtcagtccatcgttatcagt
ggtgtatttacacatcactctcgtgatgaatacaaaattcttattgaaaagaatgggggt
aaaaatacaggcagtatttctgccaaaaccaattttatattagctggtgaaaatatggga
cctgccaaattagaaaaagcacggaaattgggaataaagatcatgaatgaagatgagttt
ttagcgttgatttcctaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (29)   

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