KEGG   Bordetella holmesii 44057: D558_2414
Entry
D558_2414         CDS       T03379                                 
Name
(GenBank) pseudouridine synthase, RluA family protein
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
bhm  Bordetella holmesii 44057
Brite
KEGG Orthology (KO) [BR:bhm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bhm03009]
    D558_2414
Enzymes [BR:bhm01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     D558_2414
Ribosome biogenesis [BR:bhm03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    D558_2414
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: AIT27075
Position
2278506..2279465
AA seq 319 aa
MSDTAASADPLSDDEPLAIFIPPDTPADRLDKVLAGLMPGHSRSRLQGWIEAGHVLVNGT
VAKVRQPVGPGDQLTVWEQPAPESLAFSPEPVDFEVVDVSPEWIVVNKPAGLVTHPGADN
WNGTLLNGLLYRYPELSRVARAGIVHRLDKDTSGLMVVARTELAQTHLVRQLQARTMGRE
YICLAHGWLRAGGTVDRPIGRDARIPVRMSVERPIAPKPAVTHFRPLRQGTSGQERVTQI
VCRLETGRTHQIRVHLASLGHPLLADTLYGGRPLAGAARQMLHARALHFDDPAGRGEMAF
EADVPPDMQDVQGALEWDT
NT seq 960 nt   +upstreamnt  +downstreamnt
atgtccgatacagccgccagtgccgatccgctctccgacgatgagcctttggcgattttc
atccctccggacacgcccgctgaccgcctggacaaggtgctggcaggtctgatgcccggc
cattcccgcagccgtttgcagggctggatcgaagccggccatgtcctggtgaatggcacg
gtggccaaagtgcgtcagcctgtggggccgggagatcagcttaccgtctgggagcagccc
gctcctgaaagtctggcattttcgcccgaaccggtggatttcgaggtggtggatgtcagt
cccgagtggatcgtggtcaataagccggccgggttggtgacccacccgggcgcggacaac
tggaacggcacgttgctcaatggcttgctctatcgctacccggagctgtcccgggtggcg
cgcgctggtattgtgcaccgcttggacaaggatacatccggcctcatggtcgtggctcgc
accgaactggcgcaaacccatctcgtgcgtcaattgcaggcacgtaccatgggacgcgag
tatatctgcctggcgcacggatggctgcgcgccggcggaaccgtcgatcggcccatcggc
cgtgacgcgcggattcccgtgcgcatgagcgtcgagcgccccattgctcccaagcccgcc
gttacgcacttcaggccgctgcgccaggggacatccggccaggagcgtgtaacgcagatc
gtctgccgccttgaaaccggacggacgcaccagatccgagtgcatctggcgagtcttggc
catcccttgctggccgacaccctgtacggtggccggcccctggcgggagcggcgcgccag
atgctgcacgcgcgcgcgctgcacttcgatgatccggccgggcgcggcgagatggccttc
gaggccgatgtgccgcctgacatgcaagacgtacagggagccctcgaatgggacacgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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