KEGG T03052: D560

Bordetella holmesii ATCC 51541: D560_3284

Entry

D560_3284         CDS       T03052

Name

(GenBank) ABC transporter family protein

K06158

ATP-binding cassette, subfamily F, member 3

Organism

bho Bordetella holmesii ATCC 51541

Brite

KEGG Orthology (KO) [BR:bho00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:bho03012]
    D560_3284
Translation factors [BR:bho03012]
Eukaryotic type
  Initiation factors
   Initiation associated factors
    D560_3284

SSDB

Motif

Pfam:

ABC_tran ABC_tran_Xtn AAA_21 SMC_N ABC_tran_CTD MMR_HSR1 RsgA_GTPase AAA_29 MeaB AAA_22 AAA_23 AAA_28 AAA_18 AAA_16 KAP_NTPase DUF87 Viral_helicase1 AAA_33 FapA AAA_17

Other DBs

NCBI-ProteinID:

AHV92590

Position

complement(3046761..3048668)

AA seq 635 aa
MTLRRSTKVLLDNAEFVVNPGERVGFVGKNGAGKSSLFALLTGTLDQDAGSLDVPSGWRI
ASVQQEIAADDKPAREFVIDGDTHLRALQAERASLPDDQGDRIAELEAALAEADVWSANS
RAEQLLAGLGFAPDEWMKPVASFSRGWRMRLALARALMAPSELLLLDEPTNHLDLDAMLW
LEKWLAAYPGTVLLISHDTEFLDAVARVILHFDHGKLIRYRGGYEDFLTQRAERLHQASI
AHERQTRETARLQGFIDRFKAKASKAKQAQSRVKALARMQTLAPLHAEAGIDIRIPSPDH
TPDPLLVLDKMAAGYTRADGEPVAILQNVTLMVRAGARIGVLGANGAGKSTLIKTLAEEL
PLQAGERRASRGLAIGYFHQHQLDMLDLDATPLQHLARLASDTREQELRNYLGGFGFSGD
TVNSKVAPMSGGEKARLALSLIVWQKPNLLLLDEPSNHLDVETREALAAALAEFSGSMLL
VSHDRHLLRTTVDSFWIVSDGQVREFDGDLEDYRDWLTARNAEARAEAAPKESDSVDRKA
QRRIEAEQRQKLAVLRKPLQARLAKVESEMDKLRARLHALDALIADADLYSDARRSERQQ
VMSEHGEVGKRMNTLEEEWLDIQTSLEDLAQDLPG

NT seq 1908 nt +upstreamnt +downstreamnt
ttgaccctgcgccgcagcaccaaagtgctgctcgacaacgcagaatttgtcgtcaacccg
ggcgaacgggtgggttttgtgggcaagaacggcgcgggtaaatcgtcgcttttcgctttg
ctgacaggcaccctggatcaggatgccggttcgctggatgtgccctcgggctggcgtatc
gccagcgttcaacaggaaatcgccgcagacgacaagcccgcccgagagttcgtcatcgac
ggggacactcacttgagagccttgcaggccgagcgtgccagcctgccggacgatcaaggc
gatcggatagccgaactcgaggcggcactggccgaggccgacgtctggagcgccaattca
cgtgccgaacagttgctggccggtctcggttttgcgcctgacgagtggatgaagcccgta
gccagtttttcccgcggctggcgcatgcggctggctctggcacgcgcccttatggcgcca
tcggaattgctgctgctcgacgaacccaccaatcacttggatctggacgccatgctatgg
ctggagaagtggctggcggcgtaccccggcaccgtgctgctgatttctcacgacacggag
tttctggatgccgtcgcacgcgtcatcctgcatttcgatcacggaaaactgatccgatat
cgtggcggttacgaggactttcttacgcagagagcggaacggctgcaccaggccagcatc
gcccatgagcgccagacgcgcgagaccgcgcgcctgcaaggctttatcgatcgtttcaag
gccaaagcatccaaagccaaacaggcgcaaagccgcgtcaaagcgcttgcacgcatgcaa
acgctcgctcccctgcatgccgaagcaggtatcgatatccgcataccatcaccggatcac
acgccggacccgctgcttgtgctggacaaaatggcagctggatacacccgtgccgatggc
gagcctgttgcgatcctgcagaacgtaaccctcatggtacgcgccggggcacgcatcggc
gtgctaggcgccaatggtgcaggtaagagtacgctgatcaagacgctggccgaagagttg
cctttacaggcgggagagcgtcgtgcatcccgaggccttgccatcggctactttcaccag
catcaactcgacatgctggatctggacgccacacctcttcaacacctggcacggcttgcg
tccgacacacgcgaacaggagttgcgcaactacctgggcggattcgggttttccggcgac
accgtcaacagcaaagtggcccccatgtcgggcggagagaaggcccgtctggcgctctcg
ctcatcgtgtggcaaaagccgaatctgctgctcctggacgagccgagcaaccacctggat
gtcgaaacccgcgaagcgctcgctgcagcgttggccgagttttcgggaagcatgctgctg
gtctcgcatgaccgtcacttgctgcgcaccaccgtcgacagcttctggatcgtctccgac
ggacaagtcagggaattcgacggggatctggaggactatcgcgattggctgacagcccgc
aatgccgaagcgcgcgccgaggccgcgcccaaggaaagcgacagcgtagatcgcaaggct
cagcgccgcatcgaagctgaacaacggcagaagctcgccgttttgcgcaaaccgcttcag
gcccggctcgccaaggtcgaaagcgaaatggacaagttgcgtgcgaggctgcatgccctg
gacgcgttgattgccgatgcagacctctattccgatgcgcgccgctcagagcgccaacag
gtcatgagcgagcacggcgaagtaggcaagcggatgaatacgctcgaagaagagtggctg
gacatccagacctcgctcgaggatctcgcacaagacctgccgggctag

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (20)   
   Pfam (20)   
All databases (26)   

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