KEGG   Bartonella henselae BM1374165: BM1374165_01034
Entry
BM1374165_01034   CDS       T03309                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
bhs  Bartonella henselae BM1374165
Pathway
bhs03030  DNA replication
bhs03430  Mismatch repair
bhs03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bhs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BM1374165_01034 (dnaE)
   03430 Mismatch repair
    BM1374165_01034 (dnaE)
   03440 Homologous recombination
    BM1374165_01034 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bhs03032]
    BM1374165_01034 (dnaE)
   03400 DNA repair and recombination proteins [BR:bhs03400]
    BM1374165_01034 (dnaE)
Enzymes [BR:bhs01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BM1374165_01034 (dnaE)
DNA replication proteins [BR:bhs03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BM1374165_01034 (dnaE)
DNA repair and recombination proteins [BR:bhs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BM1374165_01034 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon
Other DBs
NCBI-ProteinID: CDO47037
UniProt: X5LZV5
Position
complement(1155976..1159464)
AA seq 1162 aa
MSEDKSKIRDEKQPFPHFIHLRVHSAYSLLEGALKIPQIIQHAISDHTPAVAITDTNNLF
GALEFSQYCFSYGIQPIIGCQLTIDFGDGNDNPRLVKWRHPSDFCSIVLLAASEIGYAHL
VRLVSRAYLDKCDTDPPHIKADWLLSHNEGIIALTGGRGGPINFSLAEERKERAIERLIY
LKKIFDDRLYVELQRHGSFDQKVEAALIELAYAYEIPLVATNEAFFLNREGYEAHDALMA
VAEGQIVSNPDRKRVTPDHYLKSQEEMVALFSDLPEALENSVEIALRCHTATPTRKPILP
RFIEQSVDLNFTLEAEDRELLNQAKAGLKMRLKTIGLAEGYTITDYEQRLDYEISVITRM
QFSGYFLIVSDFIKWAKVHDIPVGPGRGSGAGSLVAYALMITDVDPLRFSLLFERFLNPD
RVSMPDFDIDFCQERREEVIHYVQKKYGRDQVAQIITFGKLQARAVLRDVGRVLEVPYRQ
VEYLTKLVPAAPGSQVELADAIKDEPKFEEEKKKDPAIGRTLDIALQLEGLYRHASTHAA
GIVIGDRPLSELIPMYRDPRSDMPVTQFNMKYVEQAGLVKFDFLGLKTLTVLKMAVDFVA
RKGIKINLSNIPLNDETTYAMMARGETVGIFQVESSGMRKALIGMKPDRIEDIIALVALY
RPGPMENIPIYNARKHGEEEIASIHPKIDHLIKETQGVIVYQEQVMQIAQVLAGYSLGEA
DLLRRAMGKKIHTEMQKQRTRFVNGAVAGGVDKDQADIIFDLLAKFADYGFNKSHAAAYA
IISYQTAYMKAHHPVEFLAASMTYDMMNTEKLNDFRREALRLGIKVIAPCVQTSHRVFEV
GDNCIYYSLAAIKGVGEAVVDHIVVCRGNKVFKDLEDFCERIDPRIVNKRAMESLVCAGA
FDCFNIAREVLLASLGTLHARALRILDDNSSGQTDIFGITSVLKEPLILSQVSPWSLDEK
LHREFQAIGFYFSAHPLDEYQAILVKKRIQNWVNFANAVKAGATAARLAGTVVAKQVRKT
KSGKKMGIVHFSDTSGQYEAVLFSEALSDYEEILELGKSFIITVSAENRSEGVSLRLETA
QSLEKEAAQHHKMMRLFIKTVDMLPQIQQNLNPSGNGEVALILIQEDGLREVEITLPKRY
KVNSRVASALKSIQGVVDVELT
NT seq 3489 nt   +upstreamnt  +downstreamnt
gtgtcggaagataaaagtaaaatacgagatgaaaaacaaccttttcctcactttattcat
ttgagggtacactcagcttactcattgcttgaaggggctttaaaaatcccacaaattatt
caacatgcaatctcagatcatacaccagcggttgctattacggatacgaataatttattt
ggtgctttggaattttcgcaatattgtttttcttatggtattcaacccattataggttgt
caactcacaattgactttggagatggaaatgataatccgcgtttagttaaatggcgtcat
ccttctgatttttgttctattgttcttttagctgcaagcgagattggttatgctcattta
gttcgtcttgttagtcgtgcttatcttgataagtgcgatactgatcctcctcatatcaaa
gccgattggctgttgtcgcataatgaaggaatcattgctttgactggtgggagaggaggg
cctattaatttttctttggcagaagagagaaaagaacgtgctattgaacgcttaatttat
ttaaaaaagatttttgatgatcgcctttatgtggaattacaacggcatggctcttttgat
caaaaagtagaagctgcgcttattgagttggcgtatgcatatgaaattcctcttgttgca
acaaatgaggctttttttctaaacagagaagggtatgaagcccatgatgcgctgatggca
gttgcagaaggacaaattgtttctaatccagatcgcaaacgtgtgacgccagatcattat
ttgaagtcacaagaggaaatggttgcactgttttctgatcttccagaagctctggaaaac
agtgttgaaattgcattgcgttgtcatactgctacgccaactcgaaaaccaattttgcct
cgttttatagagcaatctgttgatttaaactttactttagaagcagaagatagagaattg
ttaaatcaggctaaagctggtttaaaaatgcgacttaaaacaattggactggctgaagga
tacacgattacagattatgagcagcggcttgattatgaaatttcagttattacgcgcatg
cagttttctggctattttcttattgtttcagattttataaaatgggcgaaagtccatgat
attcccgttggcccaggacgtggctctggtgctggttcacttgtggcttatgcattgatg
attaccgatgttgatccattgcgtttttctcttctctttgaaagatttctcaatccagat
cgtgtttctatgccagattttgatatcgatttttgtcaagaacggcgcgaagaagttatt
cattatgttcaaaaaaaatatggtcgtgatcaagtcgctcaaattattacgtttggtaaa
ttgcaggcacgtgcggtattgcgtgatgttgggcgtgttttagaagtgccgtatcgtcag
gtggaatatcttacaaagttggttcctgctgcgcctggaagtcaagttgagttggctgat
gctattaaggatgaaccgaaatttgaagaagaaaagaaaaaagatcctgctattggacgc
acattagatatagcgcttcagctggagggactttatcgtcatgcatcgacccatgctgca
ggaattgttatcggtgatcggccgctatcagaacttatcccgatgtaccgtgatcctcgt
tccgatatgcctgttacacaatttaacatgaaatatgttgaacaggctgggttggtaaaa
tttgattttcttggattaaaaacactgactgttttgaagatggcggtagattttgttgca
cgaaagggtatcaaaataaatttatcgaatatccctctgaatgatgaaacgacttatgcc
atgatggcacgtggtgaaacggttggcatatttcaagttgaaagttctggtatgcgtaag
gctcttattggcatgaagccagatcgtattgaagatattattgcccttgttgcgctttat
cgtcctggaccgatggagaatattccaatctataatgcacgcaaacatggggaagaggaa
attgcttctattcatcctaaaatagatcatttgattaaagaaacacaaggcgttattgta
taccaagaacaggtgatgcaaatcgctcaggtgcttgctggttattcgcttggagaagca
gatttattgcgtcgcgctatggggaaaaaaatccatacagaaatgcaaaaacagcgtacg
cgctttgtgaatggagctgttgctggtggtgttgataaggatcaggctgatattatcttt
gaccttttagcaaaatttgcagattacggttttaataaatcgcacgctgctgcttatgca
attatttcttatcaaacagcttatatgaaagcacatcatcccgttgagtttttagctgct
tcgatgacatatgatatgatgaataccgagaaattaaatgactttcggcgtgaggcatta
aggttgggtattaaagttattgcaccttgtgtgcaaacatcacatcgtgtttttgaggtt
ggtgataactgtatttattactctcttgccgccattaaaggtgtaggtgaagcggttgtt
gaccatattgttgtttgccgtggaaataaggtttttaaggatctagaagatttttgtgag
cgtattgatcctcgtattgttaataagcgtgcaatggaaagtttggtttgtgctggtgct
tttgattgttttaatattgcacgtgaagttttattggcaagccttggaacccttcatgcg
cgtgcacttcgtattctcgatgacaattctagcggacagactgatatatttgggataaca
agtgttttaaaagagcctttgatactatcgcaagtctctccttggtcactggatgaaaaa
cttcatcgagagtttcaagcaataggtttttacttttctgctcatcctctggatgagtat
caagctattcttgttaaaaaacgtattcagaattgggttaattttgccaatgctgttaaa
gctggcgcaactgctgctcggcttgctggaactgttgtggcaaagcaagtgcgtaaaaca
aaatctggtaagaaaatggggattgttcatttttctgatacgagtggacagtatgaggca
gttcttttttccgaggcgctttcggattatgaggagatattggaacttggaaaatctttt
atcattacggtgagtgcagaaaatcgctctgagggggttagtttgcgacttgagacggct
caatccttggaaaaggaagcagcacagcatcataaaatgatgcgtctctttatcaaaacg
gttgatatgcttccacaaattcaacaaaatttaaatcctagcggaaatggagaagtagcg
cttattttgattcaagaggatggattacgggaagttgaaattacgcttccaaagcggtat
aaggtaaattcgcgtgtggcaagtgctctaaaatcaattcagggtgttgtcgatgtggag
ttgacttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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