KEGG   Bradyrhizobium icense: LMTR13_33150
Entry
LMTR13_33150      CDS       T04485                                 
Name
(GenBank) excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
bic  Bradyrhizobium icense
Pathway
bic03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bic00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    LMTR13_33150
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bic03400]
    LMTR13_33150
DNA repair and recombination proteins [BR:bic03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LMTR13_33150
SSDB
Motif
Pfam: UvrC_RNaseH_dom HHH_5 GIY-YIG HHH HHH_2 UVR GIY_YIG_domain HHH_3
Other DBs
NCBI-ProteinID: ANW04271
UniProt: A0A1B1UNI8
Position
7146778..7148844
AA seq 688 aa
MDHDSTDHPKPPRRARRGSQPDLPSPDLIAADVDPATSAAEEDDEARLPEAPEEPAEAIA
EGPLAIGHAAIENAVRLAPTSAGVYRMLNAASDVLYVGKAKNVRKRLTSYARVNAPLPAR
ILRMIAATVTVEIVSTTTETEALLLEANLIKQLRPRFNVQLRDDKSFPYILITGDHWAPQ
ILKHRGAQTRPGRYFGPFASAGAVNRTITALQRAFLIRSCTDGFFESRTRPCLLYQIRRC
SGPCTREIDFPGYSELVREATDFLSGRSHAVKELLAAEMEKASNELEFETAALYRDRLAA
LSAIQSQQGINPRTVEEADVFAIYQEGGYSCVEVFFFRTGQNWGNRAYFPRAEKSFTPEE
VLASFLAQFYDDKPPPKLILLSHDIEECALLADALCVKVGYKVEISVPKRGEKKELVTHA
LTNAREALGRKLADTATQSRLLEAMAGTLGLPQVPKRIEVYDNSHIQGTNAVGAMIVAGP
DGFIKNQYRKFNIKSEGLTPGDDYAMMREVLERRFKRLLKPPEGDAAKAKADDDSFPQWP
DLVIIDGGRGQLNAVREIFEGLGLTQVSLMAVAKGPDRDAGRETLFMPDREAIKLEPRDP
VLYFIQRLRDEAHRFVIGSHRKLRKKDIREAGLQEIPGIGPSRKRALLHHFGTLKEIERA
SIADLGKVPGVSAESARKIFEFFHAQAG
NT seq 2067 nt   +upstreamnt  +downstreamnt
atggatcacgattctaccgaccatccgaagcctccgcgcagggcgcggcggggttcccag
ccggatttgccgtcaccggacctgatcgctgccgatgtcgatcccgcgacctccgctgcc
gaggaggacgacgaggctcgcctgccggaagcgcccgaggaacctgccgaagcgattgcc
gaaggcccgctggcgatcggccacgcggccatcgaaaacgcggtgcgcctggcgccgacc
tctgccggcgtctaccgcatgctcaatgctgcgagcgacgtgctctacgtcggcaaggcg
aaaaacgtccgcaagcggcttacgtcctacgctcgcgtcaacgcgcccttgcccgcgcgc
atcctgcgcatgattgccgcgacggtgaccgtcgagatcgtctccaccacgaccgagacc
gaagcgctgctgctggaagccaacctgatcaagcagttgcggccgcgcttcaacgtgcaa
ctgcgcgacgacaagtcgtttccctatatcctgatcaccggcgaccattgggcgccgcag
atcctcaagcatcgcggcgcccaaacccggcccggacggtatttcgggccgttcgcatcc
gccggcgccgtcaaccgcaccatcacggcactgcagcgcgcgttcctgatccgctcctgc
accgacggctttttcgagagccgcacgcggccctgcctgctgtatcagatccgccgctgc
tccgggccctgcacccgcgaaatcgacttccccggctattccgaactggtgcgagaagcg
accgatttcctgtccggccgtagccatgccgtgaaggagttgctcgccgccgagatggag
aaggcgtcgaacgaactcgaattcgagaccgcggcgctctatcgcgaccgcctcgcggcg
ctgtccgcaatccagtcccagcagggcatcaatccgcgcaccgtggaagaggccgacgtg
ttcgccatctatcaggaaggcggctattcctgcgtcgaagtgttcttcttccgcaccggc
cagaactggggcaaccgcgcctattttccgcgcgcggagaagtcgttcacgccggaggaa
gtgctggcctcgttcctcgcacagttctacgacgacaagccgccgccgaaactcatcctg
ctgtcgcatgacatcgaggaatgcgcgctgctggccgacgccctttgcgtgaaggtcggc
tacaaagtcgaaatctccgtgccgaagcgcggcgagaaaaaggaactggtcacgcatgcg
ctgaccaatgcgcgcgaagcgcttggccgcaagctcgccgataccgcgacgcagagccgg
ctcttggaagcgatggccggcacgctcggactgccgcaggtgccgaagcgcatcgaggtc
tacgacaacagccatatccagggcaccaacgcggtcggcgcgatgatcgtggcgggaccg
gatggcttcatcaaaaatcagtaccgcaagttcaacatcaaatccgagggactgacgccg
ggcgacgactacgcgatgatgcgcgaagtgctggagcggcgcttcaagcgtctgttgaag
ccgccggagggcgacgcggccaaagccaaggctgacgatgactcgtttccgcaatggccc
gacctcgtcatcatcgacggcggccgggggcaactcaacgcggtcagggagattttcgaa
ggtctgggacttacccaggtctcgctcatggccgtggcaaaaggcccggaccgcgatgcc
gggcgcgagaccctgttcatgccggaccgcgaagccatcaagctcgaaccacgcgatccc
gtgctgtatttcatccagcggctgcgcgacgaggcgcatcgtttcgtgatcggctcacac
cgcaaactgcggaaaaaggacatccgggaagccggcttacaggagatccctggcatcggc
ccgtcacgcaaacgtgccttgctgcatcacttcggaacgctgaaggagatcgagcgggcc
tcgatcgcggaccttggcaaggttccgggcgttagtgccgaaagcgcccgcaagatcttc
gaatttttccatgcacaagcgggttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (16)   

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