KEGG   Beijerinckia indica: Bind_0498
Entry
Bind_0498         CDS       T00688                                 
Name
(GenBank) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
bid  Beijerinckia indica
Brite
KEGG Orthology (KO) [BR:bid00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bid03016]
    Bind_0498
Enzymes [BR:bid01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     Bind_0498
Transfer RNA biogenesis [BR:bid03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    Bind_0498
 Prokaryotic type
    Bind_0498
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-ProteinID: ACB94151
UniProt: B2IEW0
Position
555948..556730
AA seq 260 aa
MPRYKLTVEYDGASFVGWQRQKNGLSVQEVIETALLAINGAPVGIRGAGRTDAGVHASAQ
VAHADLAREWRPDVLRDALNAHMRPALVAVVAAEPVPETFDARFSAIRRHYLYRIINRRA
PLTFEAGRAWLVKRRLDARAMHEAAQVLTGRHDFSTFRAAECQAASPIRTLERLDVQAVG
DLIEIRASARSFLHHQVRSMVGSLEMVGSGKWSAGDLRAALEACDRRRCGMVAPAAGLYL
TGVDYPEEGEEKGAQPFFGE
NT seq 783 nt   +upstreamnt  +downstreamnt
atgccccgctataaattaactgtcgaatatgacggcgcgtcctttgtgggttggcagagg
cagaagaatgggctctcggttcaggaagtgatcgagacggctctcttggccatcaatggc
gcgccggttggcattcgcggagcgggccgcacggatgccggcgttcatgcgagtgctcaa
gtggcccatgccgatcttgcgcgggaatggcgtcccgatgtcctgcgcgatgccttgaac
gcgcatatgcgtccggctttggtcgctgtcgtggcggcggaacctgtcccggaaacgttc
gacgcgcgcttttcagccatccgccggcattatctctaccgtatcatcaatcgccgtgcg
cctctgacctttgaggcggggcgcgcctggctggttaaacgccggctcgatgcgcgagcc
atgcatgaagcggcgcaagtcctgaccggacgccatgatttttcgacctttcgggcggcg
gaatgccaggcggcgagcccaatccgcacgctggagcgtttggacgtgcaagccgtgggc
gatctcatcgaaatccgggcgagcgcgcgatccttcctgcatcatcaggtgcgctcgatg
gtggggtcgctcgaaatggtcggttccggcaaatggagcgcaggggatctgcgggcggct
ctggaggcctgtgatcggcgccgttgtggcatggtcgctccggccgccggcctttatctg
accggggtcgattatcctgaagaaggagaagaaaaaggggctcagccctttttcggcgaa
tag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (1)   
   Pfam (1)   
All databases (21)   

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