KEGG   Beijerinckia indica: Bind_1596
Entry
Bind_1596         CDS       T00688                                 
Name
(GenBank) DNA polymerase III, alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
bid  Beijerinckia indica
Pathway
bid03030  DNA replication
bid03430  Mismatch repair
bid03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bid00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Bind_1596
   03430 Mismatch repair
    Bind_1596
   03440 Homologous recombination
    Bind_1596
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bid03032]
    Bind_1596
   03400 DNA repair and recombination proteins [BR:bid03400]
    Bind_1596
Enzymes [BR:bid01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Bind_1596
DNA replication proteins [BR:bid03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Bind_1596
DNA repair and recombination proteins [BR:bid03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Bind_1596
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon T2SSK HROB DNA_pol_lambd_f
Other DBs
NCBI-ProteinID: ACB95228
UniProt: B2IBX0
Position
complement(1799336..1802815)
AA seq 1159 aa
MPGSVGFIHLHVHSAFSLREGAIKIEKLVKLAAADAMPALALTDTNNLFGALEFSEKLVK
SGIQPIAGLQLTVDFGDGAAMAPRGEENGAGRANLVLLAQDEAGYVNLMHLTSRAWLDPV
PGDPPHVRFDQLHGHADGLIALSGGPDGPLDRAFAAQRPEQAVLRAQHLAALFPNRLYVE
LQRHSLQAERSNEPLLLDLAYDRSLPLAATNEPYFAAASDYEAHDALLCIAEGAVLGEPQ
RRQLSPEHRLKTRTEMVALFADLPEATANTVEIAMRCAYRPLTRKPILPRFGDTGHADEE
AKELRRQAEAGLEKRLAAHPPAPGFTEDDYRARLAFELDIIVKMQFPGYFLIVADFIKYA
KSQDIPVGPGRGSGAGSLVAYALTITDLDPIRFGLLFERFLNPERVSMPDFDIDFCQDRR
DEVIAYVRRRYGEDKVAQIITFGSFLARGVMRNVGRVLEMPLGQVDKLAKLVPQNPAAPV
SLKQAIEGEPRLQEAASSEPRVARMLTIAETLEGLYSNASTHAAGIVIGDRPLEHLVPLY
RDPKSDMPATQFNMKWVEPAGLVKFDFLGLKTLTTLSTCVKLLAKRGIIVDLAKIPLDDQ
KTYAMLGRGETVGVFQLESAGMRKALVEMRADHFEDIIALVALYRPGPMANIPTYCAVKL
GEEKADYIHPKIEHILKETFGVIIYQEQVMQIAQVLSGYSLGEADLLRRAMGKKIKAEMD
AQRSRFVTGSVDRGLTKKQADEIFDLLAKFADYGFNKSHAAAYALIAYQTAWFKANHPVE
FLAASMTLDKSNTDKLAEFCNEARRLGIPVDRPCIQKSGVDFDVALENKGAGQESKESEN
ANLHIRYALSAIKGVGSAQAEALVAARAGRSFKDLSDFTHRLNPREINKRMLECLVAAGA
FDTLDKDRAKIFATIETLLAMANRRCEEEAAGQSVLFGGPAASAIIFPQTDPWPLAERLQ
REFDAVGFFLSGHPLDGYASILSRLKVQRWATFARQVKQGQASAARLAATVLDRKERRTK
SGTKMGIVQLSDQSGQYEAILFQESLNQYRDMLEKGSAVLLALQANVDGEDVRARILSVE
PLDQAASRIQKGLRVFVRNEDSLASVAQKLTTRGDGEISLILMTNGGEVEVRLPGTFNVS
AQLAGSLKTIPGIVAVEPI
NT seq 3480 nt   +upstreamnt  +downstreamnt
atgcccggttccgtcggtttcatccatctccatgtccacagcgccttttccctgcgggaa
ggggcgatcaagatcgagaaattggtcaagcttgccgctgcggacgccatgccggccctg
gccctgaccgatacgaacaatcttttcggcgctttggaattttccgaaaagcttgttaaa
tcaggtattcagcctattgccggcctgcaattgacggtggatttcggcgatggcgcggcc
atggctccccgcggcgaggaaaacggcgcgggccgcgccaatctcgtcctgctggcccag
gatgaggcgggttatgtcaatctcatgcatctcacctcgcgggcttggctcgatcccgtg
cccggcgatccgccgcatgtgcgcttcgatcaactgcatggccatgcggacggcctcatt
gctctgagtggtggtcctgacgggccactcgaccgcgcctttgccgcgcaaagaccggag
caggccgtgctccgcgcccaacatttggcggccttgttcccgaaccgtctctatgtcgag
ttgcaacgccatagcctgcaggcggaacgttcgaacgaaccgcttttgctcgatcttgct
tatgatcgctcgctgccactcgccgcgaccaacgagccctatttcgctgcagcctccgat
tatgaagcccatgacgcgcttctttgcattgcggaaggcgcggttttaggcgagcctcaa
cgccgccagctttcgcccgaacaccggttgaaaacccgcacggaaatggtcgcgcttttc
gccgatctgccggaagccaccgccaatacggtcgaaatcgccatgcgctgcgcctatcgg
cccctgacgcgcaagccaatccttccgcgtttcggcgataccggccacgccgatgaagaa
gccaaggaattgcgccgtcaggccgaggcaggccttgagaaacggctcgccgcacatcct
cccgcgcccggttttaccgaggacgattatcgcgcccgtctcgccttcgagctcgatatt
atcgtgaaaatgcaattccccggctacttcctgatcgtggcggattttatcaaatatgcg
aaatcgcaggatattcctgtcgggccaggacgcggctccggcgccggctcccttgtcgcc
tatgccctgacgatcaccgatctcgatccgatccggttcggcctcctgttcgagcgtttc
ctcaatccggaacgcgtctccatgccggacttcgacatcgatttctgccaggatcggcgc
gatgaagtcattgcctatgtgcgccgccgttatggcgaggacaaggtcgcacagatcatc
accttcggctcgtttctggcgcgcggcgtcatgcgcaatgtcggccgcgttctcgaaatg
cctctcggccaggtcgataagctcgccaagctcgtcccgcaaaatccggccgcgcctgtc
agcctcaaacaggcgatcgagggcgaaccccggttgcaggaagcagcaagctccgagccg
cgtgtcgcgcgcatgttgaccatcgccgagacgcttgaaggcctctattccaacgcctcg
acccatgcggcgggcattgtcattggtgatcggccgctcgaacatctggtgccgctctat
cgtgatccgaaatcggatatgccggccacacagttcaacatgaaatgggtcgagcctgcg
ggcctcgtcaaattcgactttctgggcctcaaaaccctcacgacgctttcgacctgcgtg
aaactcttggccaagcgcgggatcattgtcgatctcgccaaaatcccgctcgatgatcaa
aaaacctatgccatgctcgggcgcggtgagacggttggcgtgttccaattggaaagtgcg
ggcatgcgcaaggcgctcgtcgaaatgcgcgccgaccatttcgaggatattatcgccctg
gtcgccctctaccggccgggccccatggccaatatcccaacctattgcgcggtcaagctc
ggcgaggaaaaggccgattacatccatcccaagatcgaacatatcctgaaggaaaccttc
ggcgtcatcatctatcaggaacaggtgatgcagatcgcccaggtgctttccggctattcg
ctcggcgaggccgatcttctccgtcgcgccatgggcaagaagatcaaggcggaaatggat
gcgcagcgcagccgtttcgtcacgggctcggtcgatcgcggcctcaccaagaaacaggcc
gatgagattttcgacctgctcgccaaattcgccgattacggattcaacaagagccatgcg
gcggcctatgctctgatcgcctaccagaccgcctggttcaaggccaatcatccggttgaa
tttctcgctgcgtcgatgacactcgacaaatccaacacggacaaactggccgaattctgt
aacgaggcgcgccgtctcggcattcccgtcgatcgcccctgcatacagaaatccggtgtc
gattttgatgtcgctctcgaaaacaaaggggcagggcaagagtcaaaagagtccgagaac
gcaaatctccacatccgttacgcgctttcagccatcaagggcgtagggtcggcccaggcc
gaggctttggtcgccgcccgcgcgggacggtccttcaaggatctgagcgattttacgcat
cgtctcaatccgcgcgagatcaacaaacgcatgcttgaatgtctggtcgcggccggagct
ttcgacacgctcgacaaggatcgcgccaagatttttgccacgatcgaaaccctgctcgcc
atggcgaaccggcgatgcgaggaagaagcagccggccaaagcgtgctgtttggcgggccg
gcggccagtgccatcatcttcccccaaaccgatccctggccgcttgctgaacgcctgcaa
cgggaatttgacgcggtcggcttcttcctgtcaggccatccgctcgatggctatgcatcg
atcctctcccgtctcaaggttcaacgctgggctaccttcgcgaggcaagtaaaacaaggg
caggcctcggccgcgcgcctcgccgcgactgtgctcgaccgcaaggaacggcgcacgaaa
tccggcaccaaaatgggcattgtgcaactatcggatcaatccggccaatatgaagcgatc
ctgtttcaggaaagcctcaaccaatatcgcgacatgctggaaaaaggctcggccgtcctg
ctcgccctgcaagccaatgtcgatggcgaggatgtccgcgcacgcattctctccgtggag
ccgctcgatcaggcggcaagccgcatacagaaaggcctgcgcgtgttcgtgcgcaacgag
gacagccttgcctctgtcgcacagaaattgacgacacgcggcgatggcgagatttccctg
atcctgatgacgaatggcggtgaagtggaagtgaggctgccaggcacattcaatgtttca
gcgcaacttgccgggagcttgaaaacgatccctggtattgtggctgttgagccgatttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (31)   

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