KEGG   Bacillus infantis: N288_03265
Entry
N288_03265        CDS       T02860                                 
Name
(GenBank) formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
bif  Bacillus infantis
Pathway
bif03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bif00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    N288_03265
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bif03400]
    N288_03265
Enzymes [BR:bif01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     N288_03265
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     N288_03265
DNA repair and recombination proteins [BR:bif03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     N288_03265
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS NFACT_N Ribosomal_S13
Other DBs
NCBI-ProteinID: AGX02616
UniProt: U5L764
Position
573324..574133
AA seq 269 aa
MPELPEMETCRQLLGRQLTGLMITEAEINREKSINVPPAEFIRQVQNSTITSIDRRAKHL
IFRLSSGKNLLLHLMLGGWMYLGNDEDNPDRTKQVILSFGSRKLYFIGLRLGYLHLLTAQ
ELEKEFEELGPEPLDPGFTAASFAQLLEKKRGMLKTSLVNQHFIAGIGNCYSDEICHQAG
LLPMRKIEELSEMEKSRLYPAMKTVFANAIQSGGYMDEPLFKGDLITGGYNERCMVYDRK
GESCLRCGSQIVKEEISSRKTFYCPGCQS
NT seq 810 nt   +upstreamnt  +downstreamnt
atgcccgagcttcctgaaatggaaacctgccgccagctgctgggccgtcagctgacgggg
cttatgatcacagaggccgaaatcaacagagaaaaatctatcaatgttccgccggcagaa
tttatcaggcaggtgcagaacagcacaatcacaagcatcgataggcgcgccaagcatctg
atcttccggctcagctccggaaaaaatcttctcctccatctgatgcttggaggatggatg
tatcttggcaatgacgaagataatcctgacaggacaaagcaggtgatcctgtcatttggc
agcaggaagctgtacttcatcggcctgcggctcggctacctgcatctgctgactgcacag
gagctggagaaagaattcgaagagctgggaccggaacctttggatcctggatttacggca
gcctcatttgcccagttattggagaaaaaacgtggaatgctcaagacatcgcttgtgaac
cagcatttcattgcaggaatcggaaactgctattcagatgaaatctgccaccaggccgga
cttttgccgatgaggaaaatcgaggagctcagcgaaatggagaagagcagactgtatccg
gcaatgaaaacagtgtttgcaaacgcaatccagagcggaggctatatggatgagccgctt
tttaaaggcgatctgataaccggcggttataatgaacgctgcatggtatatgacagaaaa
ggggaaagctgcctccgctgcggctcacagatcgtaaaggaagagatttcatcacggaaa
accttttattgtccaggctgccagtcgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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