KEGG   Bifidobacterium indicum: BINDI_0203
Entry
BINDI_0203        CDS       T03564                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03655  ATP-dependent DNA helicase RecG [EC:5.6.2.4]
Organism
bii  Bifidobacterium indicum
Pathway
bii03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bii00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BINDI_0203
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bii03400]
    BINDI_0203
Enzymes [BR:bii01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BINDI_0203
DNA repair and recombination proteins [BR:bii03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     BINDI_0203
SSDB
Motif
Pfam: DEAD Helicase_C ResIII RecG_dom3_C Flavi_DEAD AAA_30 SLFN-g3_helicase ATPase AAA_22 RecG_wedge AAA_16 mono-CXXC nSTAND3
Other DBs
NCBI-ProteinID: AIC91488
UniProt: A0A087VT18
Position
325643..328141
AA seq 832 aa
MTATVKASLSSPVSSLMTNKRRVGALKSLGINTVRDALTYYPFRVTDPVPVTTISGIVLG
RPCAFAARVESARVVPLNGRRGFRFDVVVDDSEFAAKQGQPGLVARLVFFSHRKTYMDWM
SMRLRTGARVVVAGEPGTYMDQLQFTHPETLLVEDPDSGEGGNLKADATNIQEALDRVAR
PRPVYHANSRISSDHIHDVILGFMRLLAQSDTGIDSSGGEGDQDQSRIDPEALGHGVPDI
IPEPVRAGRGLLHRAQALLGMHDPDSLKDFGDARKTLRYEEAFVSQTALLQTRQETRKSP
TYPCRDAGMDAASDSLRARFIKSLPFELTKGQSRVIEQIGEDMCGDYPMQRLLQGEVGSG
KTVVALAAMLQAVDAGHQAVLVAPTQVLAEQHYESIKGMLAAMGTEVRPKASGGKTAQAD
NVSMIDMGSDQSTELEDGILPLVLLTGGMRLAQRRQALAVSASGRPCIVVATHAAFSKTF
QAPNLALTVIDEQHRFGVEQREELRRKSERSPHLLVMTATPIPRTAAMTWFGDLDISTLT
ELPSNRKPVKTYVVSENDGATMGGMFLHLRKRIEAGERAYVVCARIDEDDDPTQDADDRG
KAAGKGRGEQDGPQPDLYQGDTDSEGTRAPLHSVAEISRRLADLPQFQGIGIATLTGRDD
DSAKTAVMAEFASGETPLLVATTVIEVGVDVPEASCIVIFDADRFGLSQLHQLRGRVGRG
GTDSWAFLVSRAPAESPAAERLEVIRSTTDGAKIAEADIQLRGAGDVLGEAQSGGRSSLK
LLRVVTDAKMITQARQEAADLLESDPDLKGQVELAGAVLDFMRGNEGFLVSA
NT seq 2499 nt   +upstreamnt  +downstreamnt
gtgacggcaacagtcaaggcaagcctgtccagccccgtatcatccctgatgaccaacaag
cgacgggtgggagccctgaaatccctgggcatcaacacggtccgggatgcactgacatac
tacccgttccgtgtcaccgaccctgtgccggtcaccaccatcagcggcatcgtcctgggg
aggccctgtgcctttgccgccagggtggagagtgcccgggtggtgcccttgaacggacgc
cgcggattccgcttcgatgtggtggtggacgattccgaattcgcggccaagcaggggcag
cccggcctggttgcccgcctggtcttcttctcgcacaggaagacctacatggactggatg
agcatgcggctccgaaccggggccagggtggttgtggccggtgagcccggcacctacatg
gaccaactccagttcacccatccggagaccctgcttgtcgaggacccggattcgggcgag
gggggcaacctcaaggccgatgcgaccaacatccaagaggccctggacagggtcgctcgt
cccagacctgtctaccatgccaactctcgcatatcgtccgaccatatccacgatgtcatt
cttggattcatgcggcttctggcccaatctgataccgggatcgattccagcggcggcgaa
ggtgaccaagatcagtcccgaatagatccggaagccctggggcatggcgttcctgacatc
attcccgaaccggtccgcgccggaaggggactcctgcatcgagcccaggccctgctgggc
atgcatgatccggactccttgaaggacttcggggatgccaggaagaccttgcggtacgag
gaggcattcgtctcgcagacagccctcctccagacccgtcaggagaccagaaagagcccg
acctatccctgtcgggatgccgggatggatgcggcttcagactccctgcgggcacggttc
atcaagtccctgcccttcgagctgaccaaggggcagagccgggtcatcgagcaaatcggc
gaggacatgtgcggcgactaccccatgcagcgcctcctccagggcgaggtcggctcgggc
aagaccgtggtggccctggccgccatgcttcaggcggttgatgccggtcaccaggcggtt
ctggtggcccccacccaggtcctggcggagcagcactacgagtccatcaagggcatgctg
gccgccatgggcaccgaggtcaggcccaaggcctccggcgggaaaaccgcccaggccgat
aacgtgtccatgatcgacatgggttccgaccagtccactgagcttgaggacggcatcctg
ccgctggtgcttctgaccggtggaatgcggctggcccagcggaggcaggccctggcggtt
tcggcctcgggaaggccatgcatcgtcgtcgccacccatgcggctttctccaagaccttc
caggcgcccaacctggctctgaccgtgattgacgagcagcatcgtttcggcgtggagcag
cgagaggaactgaggcgcaaatcggagcgctcaccccaccttctggtcatgacagccacc
cccataccccgcaccgcggccatgacctggttcggtgatctggacatctccaccctgacc
gagctgcccagcaaccgcaagccggtgaagacctacgtggtctccgagaacgatggggcc
accatggggggcatgttccttcatctccgcaagcgcatcgaagcgggggagcgggcctac
gtggtatgcgcccggattgacgaggatgatgaccccacccaggatgccgacgaccggggc
aaggcagccggaaagggacggggagagcaggacggtccccagccggacctttaccagggc
gataccgattcggaggggaccagggcaccactgcactcagtggcggaaatcagcaggcga
cttgccgacctgccccagtttcagggcatcggaatagccaccctgacgggccgcgacgac
gatagcgccaagaccgccgtaatggccgaattcgcatcgggggagacccccctgctggtg
gccaccacggtcattgaggtcggggtggatgtgcccgaggcctcctgcattgtcatcttc
gatgcggaccggttcggtctttcccagcttcatcagcttcgtggccgtgtagggcgaggc
ggcacggactcatgggccttcctggtttccagggctcctgcggaatcgccggccgccgag
cgtctggaggtcatccgcagcaccaccgacggggccaaaatagccgaggccgacatccaa
ctgcgcggggccggcgatgtactgggcgaggcccagtccggtggacgctcgtccctgaag
ctgctcagggtcgttaccgatgccaagatgatcacccaggcccggcaggaggctgctgat
ctcctggagtcagacccggacctcaaggggcaggtggaactggcgggggcggttctggac
ttcatgcgtggcaacgagggtttcctggtctcggcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (23)   

Download RDF
DBGET integrated database retrieval system