KEGG   Bombus impatiens (common eastern bumble bee): 100740390
Entry
100740390         CDS       T04362                                 
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
  KO
K02999  DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]
Organism
bim  Bombus impatiens (common eastern bumble bee)
Pathway
bim03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bim00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100740390
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bim03021]
    100740390
Enzymes [BR:bim01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     100740390
Transcription machinery [BR:bim03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     100740390
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_1 RNA_pol_Rpb1_4
Other DBs
NCBI-GeneID: 100740390
NCBI-ProteinID: XP_024224109
UniProt: A0A6P6FDR3
Position
Unknown
AA seq 1713 aa
MVQHKYHTPRLTPKHLDPKCLMFSMFTANDIRNLSVTKIRTPLSFNILGHPLKGGLYDPA
LGSLLESSDPCGTCGCNVFKCPGHFGHIELPMPVVNPLFHRRLSMLIKLACLNCFSLQIP
SYVKLLLTAKLNLLQKGYLSELESLEQEIMFVVSCSGNPYEVDVQAVQNVIDNYTENLLN
RPKLNQSIVQYDEIQLNTKNINMQWHAYVENVIKQYASLKICVNCQEPIPKITTLKNKIM
TTKMPETPNTPRTVKSRGVIHKLESVMIMPDQSKDYLRKLWQNERDFLKVLIPCFGMVDI
EYPTDIFFFEVIPVLPPIVRPVNFVNGQMIEHPQSQVYKSIIQDCLVLRNIIQTIQDGDT
NQLTEEGKLVFEQIKGNTAVEKLHNAWQNLQINVDHLMDRDMNRTADSANCQGLKQVIEK
KEGIIRMHMMGKRVNFAARSVITPDPNLNIDEIGIPEAFAMKLTYPTPVTPWNVVQLRQL
VLNGPNIHPGAVMVEHEDGSIQRISNTNAVQREAIAKRLLTTSDKANKFFKGIKIIHRHL
QNGDILLLNRQPTLHKPSIMAHKARILKGEKTLRLHYANCKAYNSDFDGDEMNAHYPQNE
LARSEGYNIANVSNQYLVPKDGTPLSGLIQDHMVSGVRLTVRGTFFPREDYMQLVYAALS
TIQDNIILLPPSIIKPVPLWSGKQIVSTVIINIIPPNQARINLTANAKISVKEWQVEKAR
QWKCGTEFLDPKTMSEAEVIIRNGELLCGVLDKTHYGATPFGLVHCIFELYGGICSTKLL
SAFGKLFQAALQRNGFTLGIEDILLLNKADKKRKEIISNCRKIGENIQRSVLELPDDIPM
DIVTSKIEESYWSDPKFRAQIDRKYKSALDVYTNDINKVCLPAGLLKKFPDNNLQLMVQS
GAKGSTVNTMQISCLLGQIELEGKRPPLMISGKSLPSFPAYDPTPRAGGFIDGRFMTGIK
PQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKHLEGLSINYDSTVRDSDGSMVQIYYG
EDGLDIPGSQFLRKEQLSFLIDNKNAILNEEIVKNLKMDSDTDKILKVVRKIKKWESKNG
SALQKRRISPFTRFSREDMNIKKSKYKEINENSGRSKASLSLMRKWLKTSEEDKKWIYAE
CTRCPDPIMSKYRQDIDFGVFSERLENLMDEYIGSKSNNLIIKKKDLRDLLSVKVMKIVC
PPGEPVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMMASKNIKTPSME
IPFRKDLKNVTKRSNKLRLQLTKCILSNVLDNINVSRKMEQLPNRQLVYTMTINYLPHKC
YKSEFCIQPHEVLKKTEEVFFKEMFKEIKKIAKVTGALVYVEEEKKSMYEDDALLDQAEP
DEGAESALKHANLGEMHESSDEEAAAEDADATLLRSISRHRENQEYEDPEEEEEIEDINE
REDDIVVEHENEKLKTNDQPQDEDDDDYDTEHEKPDYVVNETYSAQRKRDIKNMYTHVIE
YDYDEDKFTWCKLTFWLPLKMLKLDLPTITRNVANRVVLWEVPHVKRAFTFQNNNGETIL
KTDGINIVEMFKYDKSLNLNKLYSNDIYGISQTYGIEAANRVIIKEVRDVFKMYGITVDS
RHLSLIADYMTFDGRFQPLSRKGMEGSASPLQQMSFESSLNFLKNATLEGKRDNLVSPSS
RLMLGQPCKSGTGSCSLLVKIQKQPETTLSVGG
NT seq 5142 nt   +upstreamnt  +downstreamnt
atggtgcaacataagtatcatactccacgtctaactccaaaacatctagatccaaaatgt
ttaatgttttctatgtttactgcaaatgatataagaaatttaagtgttactaaaataagg
acaccattatcatttaatattttgggacatccattaaaaggaggtttatatgacccagca
ttagggtcacttttagaaagttcggatccatgtggaacatgtggatgcaatgtattcaaa
tgtccaggtcattttggacatatagaattgcctatgccagtagtaaatccactgtttcat
agacgattatctatgttaatcaaattagcatgtctaaactgtttctctttacaaattcca
tcttatgtaaaattgttacttactgcaaaattgaatttacttcaaaaaggatatctcagt
gagcttgaaagtttagaacaagaaataatgtttgttgtttcatgttcaggtaatccttat
gaagttgatgtgcaagctgttcaaaatgtaattgataattatactgaaaatcttctcaat
agaccaaaacttaatcagtctattgtgcaatatgatgaaattcaactaaataccaaaaat
atcaatatgcagtggcacgcatatgttgaaaatgttataaagcagtacgcatcattgaaa
atctgtgtaaattgtcaagaacctataccaaaaattacaacactaaaaaataaaattatg
accactaaaatgcctgaaacacctaatactcctcggacagtaaaatcacgtggagtaata
cataaattagagtcagttatgataatgccagatcaatctaaagattacctcagaaagctt
tggcaaaatgagagagatttcttaaaagtacttataccttgctttggaatggtagatatt
gaatatccaactgatatattcttctttgaagtaataccagttttaccacctatagttagg
ccagttaattttgtcaatggacaaatgatagaacatccacaatctcaagtttacaagagt
atcatccaagattgtcttgtacttcgaaatatcattcaaacaattcaagatggtgataca
aatcaactaacagaagagggaaaacttgtttttgaacaaataaaaggtaatacagcagtt
gaaaaattacacaatgcttggcaaaatctgcaaataaatgtggatcatttaatggatcgt
gatatgaatagaactgcagattctgcaaattgccagggtttaaagcaagttatagagaaa
aaggaaggaattattagaatgcatatgatgggtaaaagagttaattttgctgctcgttct
gttattactccagatcctaatttgaacatagatgaaattggtattcctgaagcttttgca
atgaaattaacatatccaacaccagttacaccttggaatgttgtacagttaagacaatta
gttttaaacggtcctaatattcatcctggtgcagtaatggttgaacacgaggatggaagt
atacaacgcatttctaacacaaatgctgttcaaagagaagccattgcaaaacgtcttcta
acaacaagtgataaagcaaacaaattttttaaaggcattaaaattatacataggcattta
caaaatggagacattctgctgttaaatcgtcaaccaactttgcataagcctagtataatg
gctcataaagcacgtattttaaagggagaaaaaacattacgtttgcattatgctaattgt
aaagcctataattcagactttgatggtgatgagatgaatgctcattatccccaaaatgaa
ctagctagaagtgaaggctacaatatagccaatgtatctaatcaatatcttgtacctaaa
gatggtactcctttaagtggtctcattcaagatcatatggtttccggtgtgcgattaaca
gtaagagggacattctttccacgtgaagattatatgcaactagtttatgctgctttatct
acaatacaggataatataattcttcttcctcccagtattataaaaccagtacccttatgg
tctggtaaacaaattgtatccactgttatcattaatattattccaccaaatcaagcacgt
atcaatttgacagcaaatgccaagattagtgtaaaagaatggcaagttgaaaaagcacgg
cagtggaaatgtggtactgaatttttagatcctaaaacaatgtcagaagccgaagtaata
atacgaaatggagaattattatgtggtgtacttgataagacacattatggtgcaactcca
tttggtcttgtacattgtattttcgaactatatgggggaatatgctctacaaagttatta
agtgcctttggtaaattatttcaagctgctttacaaagaaatggatttactcttggtatt
gaagatattttattattaaataaagcagataagaaacggaaagaaattatttctaactgt
agaaaaattggagaaaatatacagagatcagtgttagaattacccgatgatatacctatg
gatattgttacatctaaaattgaagaatcttattggagtgatcctaaattccgtgctcaa
atcgatcgaaaatataaaagcgcattagatgtctatactaatgatataaataaagtttgt
ttaccagctggtcttttgaaaaaatttccagataataatctacaattgatggttcaatcc
ggtgcaaaaggttctaccgtaaatactatgcagatatcttgcttacttggacagattgag
ttggaaggaaaaaggccacctttaatgatcagtgggaaaagccttccaagtttccctgca
tatgaccctacaccaagagctggtggttttatcgatggtagatttatgacagggatcaaa
cctcaagaattcttttttcactgtatggctggccgtgaaggtctcattgatactgctgta
aaaactagtagatcaggttatttacaaagatgtcttattaaacatcttgaaggattaagt
attaattatgattcaacagtacgagactcagacggtagtatggtgcaaatttattatggc
gaagatgggcttgatataccaggttcacaatttttgaggaaggaacaattaagtttctta
atagacaataaaaatgcgattctcaatgaagaaatagtaaagaatttaaaaatggactca
gatacagataaaattttaaaagtagtgagaaaaattaaaaaatgggaaagtaaaaacgga
agtgcattacagaagagaagaattagtccatttacaaggttttcaagggaagatatgaat
attaagaaatcgaaatataaggaaattaatgaaaatagtgggagaagcaaagcatctctg
tcattgatgagaaagtggttaaagactagtgaagaagataaaaaatggatttatgccgaa
tgtacaagatgtcctgatccaataatgtcaaaatatagacaagatatagattttggtgta
ttttctgaacgattggaaaatttaatggacgaatatataggcagtaaatctaacaatttg
attataaaaaagaaagatttaagagacctcttgtctgtgaaggtaatgaaaattgtttgc
ccgcctggtgaaccagtaggtttattagcagcacaatcaataggggagccatcaactcag
atgactttaaataccttccacttcgctggtcgtggagaaatgaacgttactttgggtata
cccagattacgtgaaatacttatgatggcatcaaaaaatattaaaacgcctagcatggag
ataccattccggaaggacttaaagaatgtaacaaaacgctcaaataaattaaggttgcaa
ttaacaaaatgcattttatccaatgttttagacaatattaatgtaagtagaaaaatggaa
caattgccaaatagacaattagtgtatactatgactattaattatcttccacataaatgt
tataaatcggaattttgtattcaaccacatgaggtattgaaaaaaactgaagaagtattt
tttaaggaaatgtttaaagaaattaaaaagattgctaaagtaacaggtgctttagtatat
gttgaagaggaaaagaaatctatgtatgaggatgatgctttattagatcaagcagaacct
gatgaaggagcagaatctgcattgaaacacgcaaatttaggagaaatgcacgaatcttca
gatgaagaagcagcagcagaggatgcagatgcaactttactacgatcaatttcgcgtcat
agagaaaatcaagaatatgaggatccagaagaagaagaagaaatagaagatataaatgaa
agagaagatgatattgttgtagagcatgaaaatgaaaaattgaaaactaatgaccaacca
caagatgaagacgatgatgattatgatacagaacatgagaaaccagactatgttgtaaat
gaaacttacagtgcacagagaaagagggatattaaaaatatgtatactcatgtaatagaa
tatgattatgacgaggataaattcacatggtgtaaattaacattttggttacctcttaaa
atgttaaaattggatttaccaacgataactagaaatgttgcaaatagagttgttttatgg
gaggtacctcacgtaaaacgtgcttttacatttcaaaataataatggagagacaattctt
aaaactgatggtatcaacatagtagaaatgttcaaatatgataaatccctaaatttaaac
aaattatattccaatgacatttatggtatttctcaaacatatggtattgaagctgctaat
agagttattataaaagaagtgagagatgtatttaagatgtatggaatcacagttgattct
agacatctatctttaattgcggattacatgacttttgatggtagatttcaacctctcagt
cgtaaaggaatggaaggttcagcatctccattgcaacaaatgagttttgaaagttccctt
aattttttgaaaaatgcgactttagaaggaaaacgagataatttagtatcaccctctagt
cgattaatgttaggtcaaccttgtaaatctggtactgggtcatgttcgttattggtaaaa
atacagaaacaaccagaaactaccttgtcagtaggtggataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (22)   

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