KEGG   Bradyrhizobium japonicum E109: RN69_03475
Entry
RN69_03475        CDS       T03509                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
bjp  Bradyrhizobium japonicum E109
Brite
KEGG Orthology (KO) [BR:bjp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bjp03016]
    RN69_03475
Enzymes [BR:bjp01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     RN69_03475
Transfer RNA biogenesis [BR:bjp03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    RN69_03475
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNase_H_2 RNase_T
Other DBs
NCBI-ProteinID: AJA59580
UniProt: A0AA87UHP3
Position
736582..737196
AA seq 204 aa
MTVRLHRGDLPDLSRYTGAVAIDTETMGLNPHRDRLCVVQLSPGDGSADVVQIPKGHTDA
PNLKALLANPAITKIFHFARFDVAVLYETFGVMTGPIYCTKIASRLTRTYTDRHGLKDLV
REVLNVDLSKQQQSSDWGSDSLTEPQLAYAASDVLHLHALRERLDAMLVREGRTALAKAC
FDFLPTRALLDLQGWAEEDIFAHS
NT seq 615 nt   +upstreamnt  +downstreamnt
atgaccgtacgcctgcatcgcggcgacctgcccgacctgtcccgctacaccggagcggtg
gcgatcgacaccgagaccatggggctgaacccgcaccgcgaccggctctgcgtggtgcag
ctctcgcccggcgacggcagcgccgacgtcgtgcagatccccaaaggccacaccgacgcg
ccgaacctgaaggccctgctggccaatcccgcgatcacgaaaatcttccatttcgcgcgg
ttcgacgtcgcggtgctgtacgagacgtttggcgtcatgaccggcccgatttattgcacc
aagattgcctcccgcctgacccgcacctacaccgaccggcatggcctcaaggacctcgtg
cgcgaggtgctcaatgtcgacctctccaagcagcaacagtccagcgactggggttccgac
agcctgaccgagccgcagctcgcctacgccgcctccgacgtgctgcaccttcatgccctg
cgcgagcggctcgacgccatgctggtgcgggaaggccgcaccgcgctggcaaaagcctgt
ttcgacttcctgccgacccgcgccctgctcgacctccagggctgggcggaagaggacatt
ttcgcgcattcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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