KEGG   Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854: BBKW_1123
Entry
BBKW_1123         CDS       T04223                                 
Name
(GenBank) polypeptide deformylase
  KO
K01462  peptide deformylase [EC:3.5.1.88]
Organism
bks  Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854
Brite
KEGG Orthology (KO) [BR:bks00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    BBKW_1123
Enzymes [BR:bks01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.88  peptide deformylase
     BBKW_1123
SSDB
Motif
Pfam: Pep_deformylase DUF6004
Other DBs
NCBI-ProteinID: BAQ29258
Position
complement(1307606..1308091)
AA seq 161 aa
MAIREIRVVPDPVLRTPCDPIKEITPAVRHLVQDLLDTVDDPGRAGLSANQIGVGLRAFS
YNINGKIGYVLNPVLEETSGEQYGDEGCLSVPGLWYKTRRADYARVRGIDLDGKTVVLEG
HGIMGRMLQHETDHLDGHVYLDRLEKEERREAMRYMRNHRK
NT seq 486 nt   +upstreamnt  +downstreamnt
ttggcaatacgtgagattcgagtcgtacctgatccggtgctgcgcactccctgcgacccc
atcaaggagattacgccggctgtgcgtcacctggtgcaggatctgcttgataccgttgac
gatccgggacgtgccggtctgtcggccaaccagattggcgtgggcttgagagcgttctcc
tacaacatcaacggcaagatcggatacgtgctcaaccctgtccttgaagaaaccagcggc
gaacagtacggggatgaggggtgcctgtccgtgcctggattgtggtacaagactcgtcgt
gccgattatgctcgtgtgcgtggcatcgatttggacggcaagacggtcgtgctggaagga
catggcattatgggccgcatgctgcagcatgaaaccgaccatctggatggccatgtctat
ctcgatcgtctggagaaagaagaacgtcgtgaggcgatgcgctacatgcgcaatcaccgc
aagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (9)   

Download RDF
DBGET integrated database retrieval system