KEGG   Blastomonas sp. RAC04: BSY18_2964
Entry
BSY18_2964        CDS       T04450                                 
Name
(GenBank) eukaryotic DNA topoisomerase I, catalytic core family protein
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
blas  Blastomonas sp. RAC04
Brite
KEGG Orthology (KO) [BR:blas00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:blas03032]
    BSY18_2964
   03400 DNA repair and recombination proteins [BR:blas03400]
    BSY18_2964
Enzymes [BR:blas01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     BSY18_2964
DNA replication proteins [BR:blas03032]
 Prokaryotic type
  DNA Topoisomerases
   BSY18_2964
DNA repair and recombination proteins [BR:blas03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      BSY18_2964
SSDB
Motif
Pfam: Topoisom_I Top1B_N_bact
Other DBs
NCBI-ProteinID: AOG00712
UniProt: A0A1B3N5S7
Position
complement(3155042..3156106)
AA seq 354 aa
MDRVDKAARGDAAAVLDGGLIYTQDDAPGITRVRRGRGFSYHAPDGRLIRDAKTLTRIRM
LAIPPAYQQVWICPKPNGHIQATGRDDRGRKQYRYHAAFRASQDKAKFARLAKFGAALPE
MRERISADLRSRSTSRRCVIATIVHLLDCTAIRIGNAPYAQQNRSYGLTTLRQRHVTLES
STIRFRFAGKGGKKWDVSLRDRRVARVLRGLQELPGQQLFGYLDGDDVRAVTSDDINAYL
REIGGEDFSAKDFRTWCGTVTATAMLAELHQQEEPPAAAAAIKQAVLAASQALQNTPTIC
RKSYIHPAVLEAYDTDQARFAGMATDDAENEVLALLLEAENRGKRGTNRQSKRG
NT seq 1065 nt   +upstreamnt  +downstreamnt
gtggatcgagtggataaggccgcgcgcggagatgcggcggcggtgctggatggcggcctg
atctatacccaggacgacgcgccggggatcacccgggtgcggcgcgggcggggcttcagc
tatcacgcgccggacggccgcctgatccgggacgccaagacgctgacccgcatccggatg
ctggcgattccgcccgcttatcagcaggtgtggatatgcccgaagcccaacggccatatc
caggcgaccgggcgcgacgaccgcggccgcaagcaatatcgctatcatgccgcgtttcgg
gcgtcgcaggacaaggccaagttcgcgcgccttgccaagttcggcgcggcgctgcccgag
atgcgcgagcgcatcagcgccgatctgcgttcgcgcagcacctcgcggcgctgtgtcatc
gctaccatcgtgcatctgctcgattgcaccgcgatccgcatcggcaatgcaccctatgcg
cagcagaaccgctcttatgggctgaccacgctgcgccagcggcatgtgacgctcgaatcc
tcgaccatccgcttccggtttgccggcaagggcggcaagaaatgggatgtctcgctgcgc
gaccggcgggtggcgcgggtgctgcgcgggttgcaggagctgcccggccagcagctgttc
ggctatctcgatggcgacgatgtccgcgcggtgacatcggacgatatcaacgcgtatctg
cgcgagatcggcggcgaggatttctcggccaaggatttccgcacctggtgcggcaccgtg
accgccactgctatgctcgccgaactccaccagcaggaggagccgcctgcggccgccgcc
gcgatcaagcaggcggtgctcgcagcatcacaggcgctgcagaacacgcccaccatttgc
cgcaagtcctacatccatcctgccgtgctcgaggcgtacgataccgaccaggcgcgcttt
gccggcatggccacagacgatgccgaaaacgaggtgctggcgctgctgctggaggcagaa
aaccgcggaaaacgcggaaccaaccggcagtcgaagcgtggttag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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