KEGG   Alkalihalobacillus lehensis: BleG1_3738
Entry
BleG1_3738        CDS       T03204                                 
Name
(GenBank) Transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
ble  Alkalihalobacillus lehensis
Pathway
ble03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ble00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BleG1_3738
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ble03021]
    BleG1_3738
   03019 Messenger RNA biogenesis [BR:ble03019]
    BleG1_3738
Transcription machinery [BR:ble03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     BleG1_3738
Messenger RNA biogenesis [BR:ble03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     BleG1_3738
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N ATPase_2 OB_RNB AAA AAA_22 Spore_III_AA AAA_25
Other DBs
NCBI-ProteinID: AIC96285
UniProt: A0A060M2N0
Position
complement(3605302..3606570)
AA seq 422 aa
MSVNITELENMTLKELYEQAKTFKVSYYSKLTKRELIFAILKGQAEQDGLLFMEGVLEII
QSEGFGFLRPINYLPSTEDIYISASQIRRFDLRNGDKVSGKVRPPKDNERYHGLLHVEAV
NGDSPETSRDRPHFPALTPLYPDVKIDLESKPGRVSSRIIDMVSPVGFGQRGLIVAPPKA
GKTSLMKEVANSIAEKHPSVELIVLLIDERPEEVTDMERSIKGEVVSSTFDEVPENHIKV
AELVLERAMRLVEHKKDVVILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFFG
AARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRRLAERRIFPSIDIRR
SGTRKEELLMPKAQLDKLWTIRKTMNESPDFTDQFIRRVKETKTNVEFFEEMQAEMTGKR
RS
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgagcgtaaatataacagaattagagaatatgacgttaaaagagctgtatgaacaagcg
aaaacgtttaaagtctcttattacagcaaactaacaaaacgagaacttatttttgctatt
ttaaaaggacaagcggagcaagatgggcttttatttatggaaggcgtattagaaattatt
caaagtgagggctttggatttctgagaccaattaattatttgccaagtacggaagatatt
tatatttctgcatcgcaaatacgtcgatttgatttacgaaatggagataaggtttctgga
aaggttcgaccgccaaaagacaatgagcgctatcacggactgctgcacgtagaagcggtt
aatggtgattcgccggaaacgtcaagagatcgtcctcattttccagcacttaccccttta
tatcctgatgtgaagattgatttagagtcaaagcccggtcgtgtttcgtcccgtattatt
gatatggtgtcaccagtgggttttggtcaacgtggactaatcgttgcgccgccgaaagcc
ggtaagacttctttaatgaaagaagttgccaatagtatagcggaaaaacatccttcggtt
gaattaattgtcctgttaatcgatgagcgtccagaagaagtaaccgatatggaacgttca
atcaaaggggaagtcgtaagttcaacatttgacgaagtgccagaaaaccatattaaggta
gctgagcttgtattagagagagcgatgcgtcttgtcgagcataagaaagatgtcgttatt
ttaatggattccattactcgtcttgctcgagcgtacaatcttgtcattccaccaagcgga
cgaacgttatctggagggattgatccagctgcttttcatcgtccaaaacgcttttttgga
gcagcgagaaacattgaagaaggcggaagtttaacgattttagcgacagcccttgtcgat
acaggttcaagaatggatgacgttatttacgaagaatttaaaggaacgggtaatatggag
cttcatttagaccgccgtcttgctgaaagaagaatcttcccgtccattgatattcgtcgt
tcaggtacaagaaaagaagagcttcttatgccaaaagcgcagctcgataagctgtggaca
attcgtaaaacgatgaatgaatcaccagatttcaccgatcaattcattcgccgagtgaag
gaaacgaagacgaacgtcgagttctttgaggaaatgcaggcagaaatgacaggcaagcga
cggtcataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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