KEGG   Bifidobacterium longum subsp. infantis 157F: BLIF_0003
Entry
BLIF_0003         CDS       T01420                                 
Name
(GenBank) recombination protein RecF
  KO
K03629  DNA replication and repair protein RecF
Organism
blf  Bifidobacterium longum subsp. infantis 157F
Pathway
blf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:blf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BLIF_0003
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:blf03400]
    BLIF_0003
DNA repair and recombination proteins [BR:blf03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     BLIF_0003
SSDB
Motif
Pfam: SMC_N AAA_23 AAA_15 AAA_27 AAA_21 SbcC_Walker_B AAA_29 AAA_13
Other DBs
NCBI-ProteinID: BAJ70150
Position
3391..4629
AA seq 412 aa
MHISRLALDHYRSWSQVVVDFVPGVNILFGKNGLGKTNLVEAVEVLSTGSSHRTSSTLPL
IERGQTTATIRANVADDAGQTTTYEASIHARGANRARINSGSSLYLRDIIGKIPSVSFTP
EDQRLVSGDPGARRTMMNQAAALLEPGYMQTLQQFTRIAKQRATLLKQLNANVNNGQPMD
AVLSGLEIWTGQFIEAGVALTRMRAHVIGLLAEPFAAIYADLAGAGEQVTLTYAPSFDEV
LMFDDPHPQISEHFQRIYPGEVARGVNLIGPQRDDMNLELGGIPAREFASNGEMWTMALA
LKMALFEIVRDRLGLQPIVILDDVFAQLDDSRRTQILDFARKQDQVLITVAAEGDVPDYE
SAHRIDVAALDEPASVILPTLGNLSNSRENESLGGYDEKTAVDSASVERKVS
NT seq 1239 nt   +upstreamnt  +downstreamnt
atgcacatctcccgtctcgcactcgaccactaccgctcatggagtcaggtagtggtcgat
ttcgtaccaggcgtgaatatcctgttcggcaagaacggtctgggcaaaaccaatctggtg
gaagccgtcgaagtgctgtccaccggatcgagccatcgcacgtccagcacgttgccgctg
atcgaacgcgggcagaccacggccaccatccgcgcgaacgtcgctgatgatgccggtcaa
accactacgtatgaagcgtcaattcatgcgcgtggtgccaaccgagcccgcatcaactcg
gggtcgtcgctgtatctgcgcgatatcatcggcaagattcccagcgtttccttcactccc
gaagatcagcggttggtgtccggcgatccgggagcacgccgcaccatgatgaatcaggct
gcggctctgctcgagcccggatacatgcagacgttgcaacagttcacgcgcatcgccaaa
cagcgtgccacattgttgaagcaattgaatgccaatgtcaacaatggccagccgatggat
gcggttctgagcggtttggaaatctggaccggccagttcatcgaagccggtgtggcgttg
acccgtatgcgcgctcatgtgatcggtctgcttgccgagccatttgccgcgatttacgcc
gacttggccggtgccggcgagcaggtgacgctcacttatgcgccttcattcgacgaagtg
ctgatgttcgacgatccgcatccgcagattagcgagcatttccaacgcatctaccccggt
gaagtggctcgcggcgtgaaccttatcggtccgcagcgcgatgacatgaaccttgagttg
ggcggtattcccgcccgcgagttcgcttcgaacggcgagatgtggacgatggcgttggcc
ttgaaaatggcattgttcgaaatagtgcgtgaccggttgggattgcagccgattgtgatt
ctcgatgatgtgttcgcccagcttgacgacagccggcgcacgcagattcttgatttcgcc
agaaaacaggatcaggtgctgattaccgtggccgctgaaggcgatgtgcccgactatgaa
tcggcccatcgcatcgacgtggccgcactggacgaaccagcttccgtgatattgccaact
ctgggcaatttgtccaattcgcgggaaaatgagagtttgggtgggtatgacgaaaaaacc
gcggtggacagcgcgtccgtagaacggaaagtgtcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (15)   

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