KEGG   Bifidobacterium longum subsp. infantis ATCC 15697 (Tokyo): BLIJ_0833
Entry
BLIJ_0833         CDS       T02092                                 
Name
(GenBank) DNA polymerase III alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
blon  Bifidobacterium longum subsp. infantis ATCC 15697 (Tokyo)
Pathway
blon03030  DNA replication
blon03430  Mismatch repair
blon03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:blon00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BLIJ_0833
   03430 Mismatch repair
    BLIJ_0833
   03440 Homologous recombination
    BLIJ_0833
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:blon03032]
    BLIJ_0833
   03400 DNA repair and recombination proteins [BR:blon03400]
    BLIJ_0833
Enzymes [BR:blon01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BLIJ_0833
DNA replication proteins [BR:blon03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BLIJ_0833
DNA repair and recombination proteins [BR:blon03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BLIJ_0833
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon tRNA_anti_2 DUF655 DUF5487
Other DBs
NCBI-ProteinID: BAJ68425
Position
954165..957698
AA seq 1177 aa
MQLHNHTHYSLLDGASKIPDLAKRAAELGMPAVGITDHGNMHGAYEMYTNCVANGVKPII
GIEAYVTPETARQDKSRVHWGTEAQRRDDVSGGGLITHLTMWAENDEGLVNLIKASSVAN
LEGRVMRYPRMDKEVLATYSKGVIASSGCPSGIIQTRLRLGQFDEALRAAGEFQDIFGKD
NFFIELMDHGLPIETQVTGDLLTIAKKLNAPLLATNDSHYVHAEDAQAQDAMLCINSGSR
LDDPDRFKFDGTGYYIKTAEEMRELFKDHPDACDNTLVIAERCNVMFDDHEDGAFMPKFP
CPEGWDETSLFLKKVEEGLEKRYDGNPPLDVLKQADYECGVICQMQFCGYFLVVADYIQW
AKDHGIMVGPGRGSAAGAMVAYSMGITELDPLKHGLIFERFLNPERVSLPDIDVDFDPEG
RARVIEYCGEKYGTDKVAQCVIYGTIKTKQALKDSARIMGYEFSVGEKVTKALPPAATGG
KDISLHDIFDPTAKRYAEAREFRELYDSDPDAKRITEEAKGIEGLIRQTGVHACATIMGS
APITDTSPLLERTDGTITTTFEYHTCETLGLVKMDFLGLSNLTIIHDTLKNIVANGKPAI
DYTKIPLDDAETYKLMSRGDTLGVFQLDSDGMRSLLKTLKPDNFNDISALIALYRPGPMS
MDSHTNYAKRKNGLQKITPIHPELEEPLKQVLDETYGLIIYQEQVQSAARILAGYSLGKA
DVLRRAMGKKKPEVLAKEKVPFFAGMKEHGYSEEASQAVWDILVPFSGYAFNKAHSAAYG
LISYWTAYLKTHYPVEFMAALLQGAATNKDKTALYLGEARRMGIQVLSPDVNESVYEYSA
VGDVVRFGLGAIRNVGDKAVADIIAEREGPRGKFVNFMDFIRRVPLTALNRRLVESLIKA
GAFDSIDPNRRALFTVHEAAIDSVVSLKRKQAEGQFDLFSDAEDGGAEAMGDASVTVPDL
EEWDKKTKLNFEREMLGLYVSDHPLSGMQSILASLREMSIAHLVDRARTMGEGQQVTLAG
LVTNVDRRVSKKGNPWAIVTIEDMESSVQCMFFGKVYEAAAAELAVDAIVQIRGQVELRD
ETVSLRATEMQIPTLEAEDERPLVITLPPVALERQRMMQLGQVLANHPGYCEVHLAVLDE
KGNAQVLTFGDRFRVKRDTSLFAEIKILFGPSCLPAA
NT seq 3534 nt   +upstreamnt  +downstreamnt
gtgcaactgcataaccacacgcactattcgctgctcgatggtgcgtcgaagatccctgat
ttggccaagcgtgcggccgaacttggcatgcctgcggtcggcatcaccgaccatggcaac
atgcatggcgcctacgagatgtacaccaactgcgtggccaatggcgtcaagcccatcatc
ggcatcgaagcttatgtgaccccggaaaccgcacgtcaagacaaatcccgcgtgcattgg
ggcactgaagcccagcgccgtgacgacgtctccggtggtggtcttatcacccacttgacc
atgtgggctgaaaacgacgaaggcctggtcaacctcatcaaagcttcgtccgtggccaac
ctcgaaggtcgcgtcatgcgttatccgcgtatggataaggaggtgctcgccacctattcc
aaaggcgtgatcgcatcctccggctgcccctcgggcatcatccagacccgtctgcgtctc
ggtcagttcgatgaggccctgcgcgccgctggcgaattccaggacatcttcggcaaagac
aacttcttcatcgaactcatggatcacggtctgcccatcgaaactcaggtgaccggtgac
ctgctgaccatagccaagaaactcaacgcaccactgctggccactaacgattcccactac
gtacacgccgaagatgcccaggcacaggacgccatgctctgcatcaactccggttcccgt
cttgacgatccggaccgattcaaattcgacggcaccggctactacatcaaaaccgccgaa
gagatgcgcgaactgttcaaggaccatccggacgcctgcgacaacaccctcgtcatcgcc
gaacgctgcaacgtgatgttcgacgaccacgaagacggcgcgttcatgccgaaattcccc
tgccccgaaggctgggatgagacctccctgttccttaaaaaagtcgaggaaggtctggag
aagcgttacgacggcaacccgccgctcgacgtattgaagcaggccgactacgaatgtggt
gtgatctgccagatgcagttctgcggatacttcctcgtggtcgccgactacattcagtgg
gccaaggaccacggcattatggtgggtccgggccgtggctcggccgcaggcgccatggtc
gcctattccatgggcattaccgagctcgatccgctcaagcatggcctgattttcgagagg
ttcctgaaccctgagcgagtgagccttcctgatatcgatgtcgacttcgaccctgaaggt
cgtgcgcgagtcatcgaatactgcggcgaaaaatacggcaccgataaggtcgcccagtgc
gtgatctatggcaccatcaaaaccaagcaggccttgaaggactccgcccgcatcatgggc
tacgagttctcggtcggtgaaaaagtcaccaaggcgctgcctcccgcggccaccggcggc
aaggatatcagcctgcatgacatcttcgacccgacagccaaacgctacgccgaggccagg
gaattccgagaactctacgattccgacccggacgccaagcgcatcaccgaagaagccaag
ggtatcgaaggcctgatccgacagaccggtgtacatgcctgcgccaccatcatgggtagc
gcgcccatcaccgacacctcgccgttgctggaacgcaccgatggcaccatcaccaccacc
ttcgaataccacacgtgcgaaacgttggggctggtcaagatggacttccttggcctgtcc
aatctgacgatcatccacgacaccctgaagaacatcgtggccaacggcaaacccgccatc
gactacaccaagattccgctcgatgacgccgaaacctacaaactcatgtcccgaggagac
acgctcggcgtgttccagctcgattccgacggcatgcgttcactgctgaaaaccctgaag
cccgataacttcaacgatatttccgcacttatcgccctgtaccgaccgggcccgatgagt
atggattcgcacaccaactatgccaagcgcaaaaacggcctgcagaagatcacgccaatc
caccctgagcttgaggagcctctgaagcaggtgcttgacgagacctatggcctgatcatc
taccaggagcaggtgcaatccgccgcccgaatcctcgccgggtattcgctgggcaaggca
gacgtgctgcgtcgagccatgggtaagaagaagcccgaagtgctggccaaggagaaggtg
ccgttcttcgccggtatgaaggagcacggatattccgaagaggcatcccaggccgtgtgg
gatattctggtgccgttctccggctacgctttcaacaaggcgcactccgccgcatacggt
ctgatctcctactggaccgcatatctgaagacgcactacccggtcgagttcatggccgcc
ttgttgcaaggtgccgccaccaacaaagacaagaccgcattgtacttgggcgaggcccgc
cgcatgggcatccaggtgctctcgccggacgtcaacgaatcggtgtacgagtactcggca
gtcggcgacgtcgtccgattcggtcttggtgccatccgtaacgtgggtgacaaggccgtg
gccgatatcatcgccgaacgcgaaggcccgcgcggcaagttcgtgaacttcatggacttc
atccgccgtgtgcccttgaccgcgctgaaccggcgattggtcgaatcgttgatcaaggcc
ggtgccttcgactcgattgacccgaaccgtcgcgcgctgttcaccgtgcacgaggccgcc
atcgactcggtggtgagtctgaagcgcaaacaggcggagggccagttcgatttgttctcc
gatgccgaggatgggggagcggaggccatgggcgacgcttccgtgaccgtacccgatctt
gaggaatgggacaagaagaccaagcttaacttcgaacgcgaaatgttgggcctgtatgtg
tctgatcatccgctctccggtatgcagtcgattctcgcgtccttgcgtgaaatgtccatc
gcgcacttggtcgatcgcgccaggacgatgggtgaaggacagcaggtcacgttggccggt
ctggtcaccaatgtggaccggcgcgtatccaagaagggcaacccctgggccatcgtgacc
atcgaagacatggaaagctccgtccaatgcatgttcttcggcaaggtctatgaagcggcc
gccgccgaacttgccgtggacgccatcgtacagattcgtggtcaagtggagttgcgcgac
gaaaccgtttctctgagagccacggaaatgcagattccgaccttggaggccgaggatgaa
cgtccgttggtcatcacgctgccgccggtggcgttggagcgccaacgcatgatgcaactc
ggtcaggtgctcgctaatcatcctggttactgcgaagtacatcttgcggtgctggatgag
aagggtaacgctcaggtgctcacgtttggcgatcgtttccgcgtcaagcgggatacttcg
ttgtttgctgagatcaagattctgtttggccccagctgcttgcctgccgcctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (20)   

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