KEGG   Brucella melitensis bv. 3 Ether: DK62_2828
Entry
DK62_2828         CDS       T03393                                 
Symbol
rnr
Name
(GenBank) ribonuclease R
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
bmee  Brucella melitensis bv. 3 Ether
Pathway
bmee03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bmee00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DK62_2828 (rnr)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bmee03019]
    DK62_2828 (rnr)
   03016 Transfer RNA biogenesis [BR:bmee03016]
    DK62_2828 (rnr)
Enzymes [BR:bmee01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     DK62_2828 (rnr)
Messenger RNA biogenesis [BR:bmee03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     DK62_2828 (rnr)
Transfer RNA biogenesis [BR:bmee03016]
 Prokaryotic type
  tRNA degradation factors
   DK62_2828 (rnr)
SSDB
Motif
Pfam: RNB S1 CSD2 RNase_II_C_S1
Other DBs
NCBI-ProteinID: AIJ87037
Position
2:complement(770227..772578)
AA seq 783 aa
MARRFSKSDTGRSARTERRAATAQSEDSAAFLPTREEVLKYIEENPDRAGKRELAKAFNI
KGDARVYLKDLLRELADEGLVEKRARKLSRPGSLPSVAVLDITGRDEDGGLLARPAEWDE
ASHGKPPVVLLRRTRLNKTSESGPVVGVGDRVLAKIFRNEDHAGPDFSARVMKRLEHHAN
AVLGVVRKLGNGEWRLEPVNRKQGEVQLDPAMLENAESGDLVEVELLSARRYGLPRGKVR
QVVGSIDSEKALSMIAIHEHEIPHVFPDEVLREAETAGPATLEGREDWREIPLITIDPAD
AKDHDDAVYAEPDTDPENPGGQVVIVAIADVAAYVRPGSALDREAQKRGNSVYFPDRVVP
MLPERISNDLCSLREMEDRPALAVRMIFSADGRKKSHKFHRIMMRSAAKVAYGQAQAAID
GAPDDKTGPILDTVLKPLWNAYAVLKRGRDAREPLELDLPEKKILLTPEGKVDKVIVPER
LDAHKLIEEFMIQANVSAAETLEGRHQPLIFRIHGEPALAKQETLREFLRTLDLNLAKGA
QLQPAQFNRILAAVDGTDHQELVNQVVLRTQSQAEYSPDNIGHFGLHLRRYAHFTSPIRR
YADLIVHRALIKALGLGTDGLTSAEEAQLEEISALISATERRAMLAERETVDRLIAHFLA
SHLGDEYEGRVTGVTRAGLFVNLATYGADGLVPISTLGDEYYLYDEANHAIAGERSGRGF
RLGDTVTVRLVEALPVAGALRFEMVSEPHPLPMSTRSHHKASRAMRGRKGKPAGIPRHKR
RGH
NT seq 2352 nt   +upstreamnt  +downstreamnt
ttggcacgccgtttttccaaatccgataccggacgatccgcacggaccgagcggcgtgca
gccacagcccaatcggaagattccgcagcctttttgccgacacgggaagaggtcctcaaa
tatatcgaggaaaatcccgatcgcgcgggcaagcgggaactcgccaaggctttcaacatc
aagggcgatgcacgggtctatctgaaagacctgttgcgtgagcttgccgatgaaggtctc
gtcgaaaagcgcgcgcgcaagctttcgcgtcccggctcgctgccatcggttgcggttctc
gatattacgggccgggatgaggatggaggcctgcttgcccgcccggctgaatgggatgag
gcgagccacggcaagccgccagtggtcctgctgcggcgaacccggcttaacaagacgtca
gaaagtggccctgtcgtcggcgttggcgaccgcgttctggcgaaaatcttccgcaatgaa
gatcacgcagggccggatttttccgcccgcgtgatgaagcggctggaacatcacgccaat
gccgttctgggcgtggtgcgcaaacttggcaatggcgaatggcggctggagccggtcaat
cgcaaacagggcgaagtgcagcttgatcccgccatgctggaaaatgccgaaagcggcgat
ctggtggaagtagaactgctttccgcgcgccgttacggcctgccgcgcggcaaggtccgt
caggtggttggctccatcgatagtgaaaaggcgctgtcgatgatcgccattcacgaacat
gaaatcccgcatgtttttcctgacgaagtgctgcgcgaggctgaaaccgcaggccctgcc
acgctggaaggccgcgaagactggcgcgaaatcccgctcatcaccatcgatccggccgac
gccaaggaccatgacgatgcggtctatgccgaaccggatacggacccggaaaatcccggc
gggcaagtcgtcatcgtcgccatcgccgatgtcgccgcctatgtgcggcccggctcagcc
cttgatcgcgaagcgcagaaacgcggcaattccgtctattttcccgaccgcgttgtaccg
atgctgcccgaacgcatctccaatgatctttgctccctgcgcgagatggaagaccggccg
gcgctggcggtccgtatgattttcagtgccgacgggcgcaagaaatcacacaagttccac
cgcatcatgatgcgctcggccgccaaggttgcctatggccaggcgcaagccgccatagac
ggcgcccccgatgacaagaccgggccgattcttgataccgttctaaagccgctctggaac
gcctatgcggttctcaagcgcgggcgtgacgcacgcgagccgctggaactcgatctgccg
gaaaagaaaatcctactgacgccggaaggcaaggtggacaaagtcatcgtgccggaacgc
ctcgatgcgcataagctcatcgaagaattcatgattcaggccaatgtgtctgccgccgaa
acgctcgaaggacggcaccagccgcttattttccgcattcacggtgaaccggcgctggcc
aagcaggaaaccctgcgtgagttcctgcgtacgctggatctcaatcttgccaagggcgcg
caactgcagcccgcgcagttcaatcgcattctggcggcggtcgatggcacagaccatcag
gaactcgtcaatcaggtcgtgctgcgcacccagagccaggccgaatacagccccgacaat
atcggccattttggcctgcatctgcgccgttatgcgcatttcacctcaccaatccgccgt
tatgctgatctgatcgtgcaccgcgcgctcatcaaggcgctggggcttggcacggacggg
ttgacgagcgcggaagaagcgcagcttgaagagatttcggccctgatttcggccaccgaa
cgccgcgccatgctggctgagcgtgaaaccgtggatcggctgatcgcgcatttcctcgcc
tcgcatctcggcgacgaatatgaggggcgcgttaccggcgtcacgcgcgccggtctgttc
gtcaatcttgcgacatatggcgcagacggactggtgcccatttcaactttgggcgatgaa
tattatctatatgacgaagcaaaccacgcaatcgcgggcgaacgaagcggcaggggcttt
cgtctgggcgatacggtaacggtgaggcttgtggaagcactccccgttgcgggtgcgctt
cgttttgaaatggtttccgaaccgcaccccttgcccatgtcgacgcgctcgcatcataag
gcgagccgggcaatgcggggccggaaaggcaagccggcgggtattccccgccacaagagg
agaggtcactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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