KEGG   Bombyx mori (domestic silkworm): 101741287
Entry
101741287         CDS       T02817                                 
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
bmor  Bombyx mori (domestic silkworm)
Pathway
bmor03420  Nucleotide excision repair
bmor04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:bmor00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    101741287
  09124 Replication and repair
   03420 Nucleotide excision repair
    101741287
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:bmor04121]
    101741287
   03400 DNA repair and recombination proteins [BR:bmor03400]
    101741287
Ubiquitin system [BR:bmor04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Adoptor protein
     101741287
DNA repair and recombination proteins [BR:bmor03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      101741287
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      101741287
SSDB
Motif
Pfam: MMS1_N CPSF_A
Other DBs
NCBI-GeneID: 101741287
NCBI-ProteinID: XP_004924093
UniProt: A0A8R2AJ91
Position
25:12828265..12852097
AA seq 1108 aa
MSYHYVVTAQKQTSVTACVTGNFTSPTDLNLLVAKVSRLEMYLVTPEGLRPMKEVGLYGK
VAKMKLFRPPYENKDLVFILTARYNAMILEWRTGANGDLEVVTRAHGNVSDRIGKPSENG
ILVVIDPQARVIGLRLYDGLFKIIPLEKDSAELKAASLRLEELNVYDVEFLHGCANPTLI
LIHQDTNGRHIKTREIGLRDKDFIKVSWKQDNVETEASILIPVPSPLGGAIVIGQESIVY
HDGQSYVAVAPPQIKMTPINCYCRVDSRGLRYLAGDIAGRLFMLLLELHEKMDGTQAVKD
LKVELLGDIPIPECMTYLDNGVVFIGSRLGDSALVRLSSSRDDTHQYVLPMETFTSLAPI
VDMCVVDLERQGQSQLITCSGAFKMGSLRIIRNGIGIQEQASIDLPGIKGMWPLTLAPDS
AHHDTLVLSFVGQTRVLALNGEEVEETEIKGFLSDRQTFFTGNVCYDQLIQVTDEGVRLA
GRAGAGWCVTSQWRAPAALSVVACARSRLVCAAGPRLYLLLLHEAAIELKAEVCMEEEVA
CLDLGPGEEQALLGVGLWTDISVRVLRLPDMTPLHTEKLYGEIIPRSLIISVLEGVCYLL
CALGDGSMFYFTVDQKTGVLSNKKKVTLGTQPTVLRTFRSLSTTNIFACSDRPTVIFSSN
HKLVFSNVNLKEVTHMCSLNAQAYPDSLALATDSTVTIGTIDEIQKLHIRTVPLGETPRR
IAYQEASQTFAVITMRVEKLEWGGGEAGRALDHELHNLLILDHHTFEVLHSHQLMSSELA
MSLMSCRLGDDPAHYYAVGTAILNPEEPEPKKGRILLFHWSEGKLVQVAEKEIKGGCYSL
VEFNGKLLAAINSTVRLFEWTSDKELRLECSHFNNIVALYLKAKGDFILVGDLMRSMSLL
QYKQMEGSFEEIARDYSPNWMTAVEILDDDTFLGAENSFNLFVCQKDSAATTDEDRQQMG
YAGQFHLGDMVNVMRAGSLVAPHHHADSAAPTHRPVLLATVHGAIFLVAQISQELFEFLQ
QVEERLSHCIKSVGRIPHAFWRSFNTDIKTEPAEGFVDGDLIETFLDLNRDVQHDIVKGL
QIDEGSGMMRDAKIDDLIKIVEDLTRIH
NT seq 3327 nt   +upstreamnt  +downstreamnt
atgtcttaccactacgtggtcacagcccaaaaacagacttcggtcacagcatgtgtaaca
ggaaacttcacatcaccaacagacctaaatctactagtagcaaaggtgtctcgcctggag
atgtacttggtcacaccagaaggacttcgccccatgaaggaagttggtttatatggaaaa
gttgcaaagatgaaactctttagaccaccgtatgaaaataaagatctagtatttattcta
actgcaagatacaatgccatgatattagaatggcgtacaggtgcaaatggtgatctcgaa
gttgtgacacgtgcacatggtaatgtatccgatcgaattgggaaaccatcagagaacggc
atcctagttgtgatagatccccaggcaagggtcatcgggttgaggctgtatgacggtctc
ttcaagattataccattggagaaggactcagcagagctgaaggctgccagcttgaggtta
gaagaattgaatgtttacgatgtcgaattccttcatggatgtgcgaatccgacattgata
ctgatccatcaggatacaaatgggagacacattaagacacgcgagataggattaagagat
aaagactttataaaagtatcatggaaacaggataatgttgaaactgaagcatccatactc
attccggttccgagtccactaggcggagccatagttattggtcaagaatctatagtgtat
cacgacggtcagagctatgtggctgtcgctccaccgcagatcaagatgacacctatcaac
tgttactgccgcgtggacagccgcggcctgcgctacctagccggcgacatcgcggggaga
ctgttcatgctgctgctggagttacacgagaagatggacggcacgcaggccgtcaaggac
ctcaaggtcgagctcttaggcgacatccccatcccggagtgcatgacgtacctggacaac
ggggtcgtgttcatcggctcccggctgggcgactccgcgctggtccgcctgtccagctcc
cgggacgacactcaccagtacgtgctgcccatggagacgttcaccagcctcgcgcccatc
gtcgacatgtgcgtcgtggacctcgagcgccaaggacagagccagctcatcacctgctcc
ggggcgttcaaaatgggttcgttacggatcatccgcaacgggatcggcatccaggagcag
gcctccatcgacctgcccggcatcaagggcatgtggcccctcaccctcgccccggactcc
gcccaccacgacaccctggtgctgtcctttgtcggacaaactagggtgctggcgcttaat
ggcgaagaagtcgaagagacggagatcaaggggttcctctcggacagacagacgttcttc
acaggcaacgtatgttacgaccagctgatacaggtgacggacgagggcgtgcggctggcg
ggtcgcgcgggcgcggggtggtgcgtgacgtcacagtggcgcgcgcccgccgcgctgtcc
gtggtggcgtgcgcgcgcagccgcctcgtgtgcgccgccggcccgcgcctctacctgctg
ctgctgcacgaagccgccatcgagctcaaggccgaggtgtgcatggaggaggaggtggcg
tgcctggacctgggccccggcgaggagcaggcgctgctgggcgtggggctgtggaccgac
atctccgtgcgcgtgctgcgcctgcccgacatgacgccgctgcacaccgagaagctgtac
ggagagataataccgcggtcgctcatcatcagcgtgctggagggcgtctgctacctgctg
tgcgcgctgggggacggctccatgttctacttcaccgtcgaccagaagaccggagtgctg
tccaacaagaagaaggtgaccctcggcacccagcccaccgtgctcaggaccttcaggtcg
ctgtccacgacgaacatattcgcgtgctcggaccggcccaccgtgatattctcgtccaac
cacaagctcgtgttctccaacgtcaacctcaaggaggtcacgcacatgtgctcgctcaac
gcgcaggcctaccccgacagcctggcgctggccacggacagcacggtgaccatcggcacc
atcgacgagatccagaagctgcacatccgcaccgtgccgctgggggagacgccgcgcagg
atcgcctaccaggaggcctcgcagaccttcgccgtgataacgatgcgcgtggagaagctg
gagtggggcggcggcgaggcggggcgggcgctggaccacgagctgcacaacctgctcata
ctcgaccaccacaccttcgaagtgctgcactcgcaccagctgatgtcgagcgagctggcc
atgtcgctgatgtcgtgccgcctgggggacgaccccgcgcactactacgccgtggggacc
gccatactcaaccctgaggagccggagcctaaaaagggcaggatactgctgttccactgg
tccgaagggaaactggtacaagtagccgaaaaggaaatcaaagggggctgctactcgctg
gtggagttcaacggcaagctactggccgccatcaacagcacggtgcggctgtttgagtgg
acgtcggacaaggagctgcggctggagtgcagtcacttcaacaacatcgtggctctgtac
ctgaaggcgaagggagacttcatcctggtcggggatctgatgcgctccatgtcgctactg
caatataaacagatggagggcagcttcgaggagatagcccgcgactacagccccaactgg
atgacggccgtggagatcctggacgacgacacgttcctgggcgcagagaacagcttcaac
cttttcgtttgtcaaaaggacagcgcggccaccacggacgaggaccggcagcagatgggc
tacgcggggcagttccacctcggcgacatggtcaacgtcatgcgcgccggctccctcgtg
gcgccgcaccaccacgccgactccgccgcgcccacgcaccgccccgtgctgctcgccacc
gtgcacggcgccatctttttagtggctcagatatcccaggagctgttcgagttcctgcag
caggtggaggagcggctgtcgcactgcatcaagtccgtgggccgcatcccgcacgccttc
tggcgctccttcaacaccgacatcaagaccgagcccgccgaggggttcgtcgacggggac
ctcatcgagaccttcctcgacctcaacagggacgtgcagcacgacatcgtcaagggacta
cagatcgacgagggcagcggcatgatgagggacgccaaaatagacgacttaatcaaaata
gtggaagacctaacgaggatacattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (44)   

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