KEGG   Bacillus pseudomycoides 219298: DJ92_5371
Entry
DJ92_5371         CDS       T03239                                 
Symbol
helD
Name
(GenBank) helicase IV
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
bmyc  Bacillus pseudomycoides 219298
Pathway
bmyc03420  Nucleotide excision repair
bmyc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bmyc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    DJ92_5371 (helD)
   03430 Mismatch repair
    DJ92_5371 (helD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bmyc03400]
    DJ92_5371 (helD)
Enzymes [BR:bmyc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     DJ92_5371 (helD)
DNA repair and recombination proteins [BR:bmyc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DJ92_5371 (helD)
   MMR (mismatch excision repair)
    Other MMR factors
     DJ92_5371 (helD)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 Viral_helicase1 SLFN-g3_helicase AAA_30 PhoH DEAD NACHT AAA_16 RNase_H2-Ydr279 nSTAND3
Other DBs
NCBI-ProteinID: AIK36650
Position
complement(5223987..5226335)
AA seq 782 aa
MGKTGQEWKQEQHRVKEVVGKIEKHIDTLEQYTSAATKDVVQIRKHFWDDVTVNVDNTEE
AIETAASIKQQAELLSEREQSHRHAYNQLKGLQRLQQSPYFGRVDFLEDGEKSEDAIYLG
IHSFYDEQTEQFLVYDWRAPISSLYYDYSVGRAKYEAPNDTISGEMTLKRQYVIRNGRIV
SMFDTGVTIGDKLLQEVLGNNANTQMKSIVSTIQKEQNQIIRNEKSRLLVVQGAAGSGKT
SAALQRVAYLLYRYRETLHADQIVLFSPNSMFNSYVSTVLPELGEDNMKQTTFQEYLERH
IDKKFELEDPFTQMEYVLTRMEEKSYKTRLEGIRYKASSDFIEVVDQYVSYLKREGMLFK
DIKFRGEVLISKEQIKEQFYKFDPSIRIPNRIKLISEWLLKELKEQEKIERKKLWVEEEV
QLLDKETYAKVHRKLQKRQEYSDGTFDDFEREQNMLAAIVVKKYFKPLRRRVKKLQFIHT
SALYIQLFKDPEFAKQLVEEYKLPQKWDEICGETIEKMQGFYMAYEDATPYLYMKDQLEE
LQKNTSVQHIFIDEAQDYSAFQYAFLKRIFPHTKMTILGDFNQTIYEHASENEFSQLSTL
YGEELSGKIVLTRSYRSTKQIIEFTKQLIDGDEIEPFQREGKQPIITEVKEGEAHHKKIV
DQIEHLKQSGHRTIAVICKTAEESEEAYYALQTSLPVRLIKKETSSFDEGILIIPSYLSK
GVEFDAVIIYDASEKKYSRESERKLFYTACTRAMHELYIYSVGEMNEFLQSVSPKTYCYK
KI
NT seq 2349 nt   +upstreamnt  +downstreamnt
atggggaaaacaggtcaagagtggaaacaggaacaacatcgtgtgaaagaagtagttgga
aagattgaaaaacatattgatacattagagcaatatacaagtgcagcaacaaaagatgtt
gtccagattcgaaaacatttttgggacgatgtaactgtgaatgttgataatacagaagag
gctatcgaaacggcagcaagtatcaaacaacaagcagagttattatctgaacgagagcaa
agtcaccgccatgcttacaatcaactaaaaggattacaaagattacagcaatcaccatac
tttggaagggtagattttttagaagacggtgaaaaaagtgaggatgctatttatcttggt
attcactcattctacgatgaacagacagaacaatttcttgtgtatgactggcgagcccct
atatcaagtttgtattatgactattctgtaggaagagctaaatacgaagcacctaatgat
acgatttcgggtgagatgacattaaaaaggcaatatgttattcggaatggtcgaattgta
agtatgtttgatacaggagtgacgattggcgataaattgttacaagaagtattaggaaat
aacgccaatacacaaatgaaaagcattgtttcaacaattcaaaaggaacaaaaccaaatt
atccggaatgaaaagagtcgtttacttgttgttcaaggagctgcaggaagcggtaaaaca
tcggcagctcttcagcgcgttgcatatttattatatcgttatcgagagacattacacgcc
gatcaaatcgttctcttttctccaaactcgatgtttaatagctatgtatctacagtattg
ccggaacttggtgaagacaatatgaagcaaacgacattccaagaatacttagagcgtcat
attgataagaaatttgaattagaagatccatttacacaaatggaatatgtactgacaaga
atggaagaaaagagttataaaacacgattagaagggattagatataaagcaagttctgat
tttattgaagtagtagatcagtatgtatcttatttaaaacgagaaggtatgttatttaaa
gatataaaatttagaggggaagtattaatctctaaagaacaaataaaagaacaattttat
aaatttgatccttcaatacggattccgaatcgaataaagttaatttctgagtggttgtta
aaggagctgaaggagcaagaaaaaatagagaggaaaaaactttgggtggaagaagaagta
cagttattagataaagaaacatacgcaaaagttcatcggaaattacagaaaagacaagaa
tattccgatggtacgtttgatgattttgaacgtgaacaaaatatgttagcagctattgtt
gtgaaaaaatattttaaaccgctccgaagacgtgtgaaaaaattacaatttattcataca
tcagcactctatatacagttatttaaagatcccgagtttgctaagcaacttgtagaagaa
tataaattaccacaaaaatgggatgaaatatgcggagaaacaatagaaaaaatgcaaggt
ttttatatggcgtatgaagatgcaacgccttatttatacatgaaagaccaactagaagaa
ttacaaaaaaatacatctgtgcagcacatatttattgatgaagcgcaggattattctgca
tttcaatatgcatttttaaaacgaatattccctcatacaaaaatgacgatactaggcgat
tttaatcagaccatttatgaacatgcgtcagagaatgaattttcacagttaagtaccttg
tatggggaagaactaagtggaaaaattgttcttacacgtagttatcgctctacaaagcaa
attattgaatttacgaagcagttaattgacggtgatgaaattgaaccgtttcagcgtgaa
ggaaaacaaccgattataacagaagtgaaagaaggagaagctcatcataaaaagattgtg
gaccaaatcgaacacttgaagcaaagtggtcacagaacaatcgcggttatttgtaaaaca
gcggaagaaagcgaagaagcgtactatgccctacaaacatcattaccagttcgcctcatt
aagaaagaaacgagttcgtttgatgaaggtattttgattatcccatcgtatttatcgaaa
ggggtagagtttgatgcggtcattatctacgatgcatcagagaaaaaatacagccgagaa
agtgaacgtaagttattttataccgcttgtacgcgtgcgatgcatgagttatatatttat
tctgtaggggagatgaatgaatttttacagtctgtttctccaaaaacgtattgttacaag
aaaatatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (13)   
   Pfam (13)   
All databases (23)   

Download RDF
DBGET integrated database retrieval system