KEGG T04128: 106354462

Brassica napus (rape): 106354462

Entry

106354462         CDS       T04128

Name

(RefSeq) sister chromatid cohesion 1 protein 4-like isoform X1

K06670

cohesin complex subunit SCC1

Organism

bna Brassica napus (rape)

Brite

KEGG Orthology (KO) [BR:bna00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bna03036]
    106354462
Chromosome and associated proteins [BR:bna03036]
Eukaryotic type
  Sister chromatid cohesion proteins
   Cohesin complex
    106354462

SSDB

Motif

Pfam:

Rad21_Rec8_N Rad21_Rec8 CNDH2_N

Other DBs

NCBI-GeneID:

106354462

NCBI-ProteinID:

XP_013649847

Position

A2:1857542..1862991

AA seq 993 aa
MFYSQFILAKKGPLGTIWIAAHLERKLRKNQITDTDIGVSVDSILFPEAPIALRLSSHLL
LGVVRIYSKKVNYLFDDCSEALLKVKQAFRSAAVDLPPEESTAPYHSITLPETFDLDDFE
LPDSELFQGSNYVDHHVSTREQITLQDTMDGVVYSTSQFGLDERFGDGDTSQAALELEEE
VFQDKEVIGSDDDGVQGTDHNAYMDAATPEIKGDMVGASDAIPRDFNQEQVEDLALRNEV
IEDAQAPQTPGLVEVPNSSSVREQLASDDQMEVEDLNAEERSKASGEPVANEMLNDLTSG
YNEGESAVTPMEVDKSLIDENVNAQNEPEEEERAEHVHVTSPCCSHTRAEMEEGPGQAIT
EAGTNVVANKSDAEPCLTQHPKDPIEENQDHFAIASATEVNHETDSRPEEQLNNADATDE
QLGNLTGSTDSDVPAPEKVLAAPPNRLGDENGFMVESTTPDGTCNEDAGNNNITGKKRTF
TESTLTAESLNSVESVGLVQSKRTADSIPDDDDLLSSILVGKSSFLRMRSTPVVEKATTK
RLRASAPRSTATKRKVLMDDPMVLPGDVIREQLTNTESIRRVRKKAPCTVSEILMLQRQA
LEDGLLKEPIFTGMSVELVSLHNEPYDLRGIIVIENDERHASVGVVEGNECSVRAVEDNA
TEESSDPQPAEADATQPHDQQEEVKDDNELGETRSDLEVSKEGNGDAAAVEVDLVVNSEI
SQPSEDKLDHVEVEGCHGNHDGGLEGQDVIEIAEGDVENNAVLNETDFKAEDELPSEDKK
TDASAAASEFWIDDQTPCDITVGSIETGCLAAGDFSDPALETCNEPLMEANSDGVDPHNE
MFNEEAYMQSAADTELPSGDGLMGDNGEMDTVEVAHDTGFLNVDDDEVDEDHEEDDGIQD
GDEARLLENSGWSSRTRAVGKYLQTIFDKEAENGKNVVVVADKLLAGKTRKEASRMFFET
LVLKTRDYIQVEQAKPYESIIIKPRPKLTKSIF

NT seq 2982 nt +upstreamnt +downstreamnt
atgttttattcacagtttatattagctaagaaaggaccacttgggactatatggatcgct
gcccatttggagaggaagcttcgaaagaatcagatcactgatactgacatcggtgtctcc
gttgattctattctatttccggaagctccaattgcgttgcgtttgtccagccatcttctc
cttggtgtggtgcgtatatactctaaaaaggtgaactacctattcgatgattgcagcgag
gcgttgcttaaggtgaaacaagcttttcgctctgctgctgttgacttaccccctgaagag
tccactgcaccgtatcactcgattactttgcctgagacttttgatcttgatgattttgag
ctccctgacagtgagctctttcagggcagtaattacgttgaccatcatgttagtacaaga
gagcagatcactcttcaggataccatggatggtgttgtatactccacatcgcaatttgga
ttagatgagagatttggtgatggcgacacttctcaagctgctttggagcttgaagaggaa
gtattccaggacaaggaagttattggatccgacgatgacggagttcaaggcactgatcac
aatgcatatatggatgcggcaacaccggagataaagggtgacatggtaggagcttctgat
gccattcccagagatttcaatcaagagcaggttgaagatctagctttgcgtaatgaggtc
attgaagatgctcaagctcctcaaacccctgggttggttgaggtgccaaactcgtccagc
gtcagagagcagctggcaagcgatgatcagatggaggtagaggatctgaatgcagaagaa
cgtagcaaggcctctggagagccggttgctaatgagatgcttaatgacctgacctctgga
tataatgaaggagaatctgcagttactcccatggaggtggataagtcgctgattgatgaa
aatgtcaacgcacaaaacgagcctgaggaggaggagagggcagagcatgtacatgttaca
tcgccatgttgttctcacaccagggcagagatggaggagggtcctggtcaagcaatcact
gaggcaggaaccaatgttgtggcgaataagtcagatgctgagccttgtttaactcaacac
cctaaagatcctatagaagagaaccaagatcattttgccattgcgtcagccactgaggtc
aatcatgaaacagattctaggccagaggagcagctgaataacgcagacgcaactgatgag
caattgggaaacctgactggatctactgattctgatgtgcctgcacctgaaaaggtatta
gcagcaccacctaacagactgggagatgaaaacggtttcatggttgaatctactacacca
gatggcacatgtaacgaggatgcaggaaacaataacattactggaaaaaaacgcacgttt
actgagagcaccctaactgcagagagtctgaactctgttgagtcagttggactggttcag
tccaagagaactgcagattctattcctgatgatgatgacttgttgtcttccatcttagtg
ggaaagtcatcctttctgaggatgaggtctacacctgtagttgaaaaagcaactacaaaa
cggttaagagcttctgctcctcgttctactgccacaaagaggaaggttctaatggatgac
cctatggtcttgcctggcgatgttatacgggaacagctgacaaacactgaaagtatacgc
cgtgtgcgaaagaaggcgccttgcactgtttctgagatcttaatgcttcaaaggcaggct
ttggaggatggactcttgaaggagcctatattcactggtatgtcagtggagttagtatct
ctacacaatgagccgtatgatcttagaggaatcattgtaatcgagaatgatgagcgtcat
gcttctgttggagtggtggaaggtaatgaatgttctgtcagggctgtggaagataatgcg
actgaagaaagctctgatcctcaacctgctgaggctgatgctacccagccacatgaccaa
caggaagaagtgaaagacgataatgagcttggtgaaacaagatctgacttggaagtttca
aaagaaggcaatggagatgcagcagctgttgaagtcgatcttgtagtgaatagcgagatc
agtcaaccatctgaggacaaactcgatcatgtggaggtggaaggatgccatgggaaccat
gatggagggctagagggtcaagatgttatcgaaattgctgaaggcgatgtagaaaacaac
gccgttctcaatgaaacagactttaaagctgaagatgagcttccaagtgaagataagaag
acggatgcatcagctgcagccagcgagttttggatagacgaccaaactccatgcgatatc
acagttggttctattgaaactggatgcttagcagctggtgattttagtgatccggctttg
gaaacttgcaacgaacctctaatggaagcaaatagtgatggggtggatccacataatgag
atgtttaatgaggaggcttatatgcaaagtgcagcagatacagaacttccttctggtgat
ggtcttatgggagacaatggtgaaatggataccgtggaagtggcacatgacacaggattt
ttgaacgtggatgatgatgaagtagatgaagatcatgaggaggacgatggtatacaagat
ggtgatgaagctcgtcttctagagaacagtggatggtcttctcgtaccagggctgtgggg
aagtatctccagacgatttttgataaagaagctgagaatgggaagaatgttgttgttgta
gcagacaaacttttagctggaaaaactcgtaaagaagcatctagaatgttttttgaaacc
ctggtattgaaaacaagagattacatccaagttgaacaagctaagccttacgaaagcata
atcataaaaccgcgaccaaaactcaccaaatccatcttctaa

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

Download RDF

DBGET integrated database retrieval system