KEGG T04128: 106400756

Brassica napus (rape): 106400756

Entry

106400756         CDS       T04128

Name

(RefSeq) retinoblastoma-related protein 1 isoform X1

K04681

retinoblastoma-like protein 1

Organism

bna Brassica napus (rape)

Brite

KEGG Orthology (KO) [BR:bna00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:bna03000]
    106400756
Transcription factors [BR:bna03000]
Eukaryotic type
  Other transcription factors
   Pocket domain Rb
    106400756

SSDB

Motif

Pfam:

RB_A RB_B DUF3452 Rb_C TFIIB

Other DBs

NCBI-GeneID:

106400756

NCBI-ProteinID:

XP_013696594

Position

C3:complement(26303302..26308779)

AA seq 1011 aa
MEEVQPPVTPPIDSNGDRSEATFLDLCEKVLFLEGSVCDEALKLFTETKQILSANMSNIG
SGTAEEVERFWFASILYSVKMLSVRRQVDGKSVVAGGNGFNLCQILRALKLNIVDFFREL
PQFVVKAGPVLCELYGSDWESRLQAKEMQVNVVHLSLLSSYYKRGYREFFLTYDANAENT
PANSPSYLPDSYRFGWLLFLALRNHAFSRFKDLVTCTNGLVSILAILIIHVPCRFRNFCI
KDSSRFVKKGDKDVDLIASLCKIYDASEDELRATMDKTNNLIETILKKKPSACQTDKLDN
IDTDGLTCFEDLLDETSISTSLITLEKDYTDAVCNKSELDERVFINEEDSLLGSGSLSAG
AVNITGVKRKIDSLSSPARTFISPLSPHKSPAAKTNSIGCANRLTATPVSTSMTTAKWLR
TVICTLPPKPSPGLERFLKSCDRDITSDVTRRAHVILEAIFPNSFLGDRCTGGSLQPVNL
MDDIWAKERRLEAIKLYYRVLETLCRAEAQILHATNLNSLLTNERFHRCMLACSAELVLA
THKSITMLFPAVLERTGITAFDLCKVIESFIRYEDSLPRELRRHLNSLEERLLESMVWEK
GSSMYNSLIIAKPSLAQEINQLRLLAEPMPSLDAIAALINFSEGLNHASSIQKHETCPGQ
NGDIKSPKRQCTDYHSVLVERNSFTSPVKDRLLASGNVKSKLPPPPLQSAFASPTRPNPG
GGGETCAETGINIFFTKINKLAAVRINGMVERLQLSQQIRESVYRLFQHVLTQQTSLLFN
RHIDQIILCCFYGVAKLSQMRLTFKEIVFNYRKQPQCKPLVFGSVYVDSFHCRRQGRVGP
DHVNIITFYNDVFVPAAKTLLVEIVPVKNDQDVEANNKPEGHCPGSSKVSVFPSVPDMSP
KKVSAVHNVYVSPLRASKMDALISHSSRSSYACVGESTRAYQSPSKDLSAINNRLNNSSN
RNRKRTLNFDVELVSDSMVANSLPLQKQQNQNGSDASPSGGAPLKTEPLHS

NT seq 3036 nt +upstreamnt +downstreamnt
atggaagaagttcagcctccagtgacaccacccattgactctaatggagacagaagtgaa
gcaactttcttggacttatgcgagaaagttttattccttgaagggagcgtttgcgatgaa
gctttgaagttgtttacagaaaccaaacagattttgtcagcaaacatgtctaacattgga
agtggaacggcggaggaagtggagaggttctggtttgcgtctattctctactcagtaaag
atgctttctgtgagaagacaagtggatggcaagtcagtagtggctggtggtaatggtttt
aatctatgtcagatactgagggctctaaagctcaatattgtggatttctttagagagttg
cctcagtttgtggtcaaggctggtcctgtgctatgtgaactttatggttcagactgggag
agcagacttcaggcaaaggagatgcaggtgaacgttgtccatcttagccttctaagcagt
tactacaaacgagggtaccgcgaattcttcttgacatacgatgcaaacgcagaaaacacc
ccagctaactctcctagttacttgccggatagttaccgttttggatggttactctttttg
gcactccgaaaccacgcttttagtcgatttaaagaccttgtgacatgcacgaatggccta
gtttctatactggctattttgatcatacacgtcccttgccggtttagaaatttctgcatc
aaagactcttcacgctttgtaaagaaaggtgacaaagatgtagacttgattgcatcgctt
tgcaagatatatgacgcctcagaggatgagctgagggcaacaatggacaagaccaataat
ttgatagaaacaatattgaagaagaagccatccgcatgccaaactgacaagctagataat
attgacacagatggtctgacatgctttgaggatttactggacgagacatccatctcaacc
agcttgatcacactagaaaaagattacactgatgcagtctgtaataaaagcgaacttgat
gagagagtcttcatcaatgaagaggatagcttgcttggatctggaagcttatctgcagga
gctgttaatattactggcgttaagaggaaaattgattctttgagctcacctgcgaggaca
tttataagtccactctctcctcataagtcacctgccgctaagacgaatagtattggctgt
gctaacaggttgacagcaacaccagtgagcacatcaatgacaactgccaaatggctcagg
actgttatatgtacgcttccgccaaaaccttctcctgggttggaacgtttcctgaaatca
tgtgatagggatataacaagcgatgtcactcgaagagcacatgtgatattagaagctatt
tttccaaatagtttccttggtgaccgatgtacaggcggaagtttgcaacctgttaacctt
atggatgacatatgggcaaaagagcggagattagaagctatcaagctatactacagagtt
cttgagacactgtgcagagcagaagctcagattctgcatgcaaccaacttaaactcttta
ctgacaaatgagaggttccatagatgcatgctggcctgttcagctgaattggttcttgct
acccacaaaagcataacaatgttgttcccggctgttctggagaggactgggatcacagcc
tttgatctctgcaaggttatagagagcttcatcagatacgaggattctctgcctagagaa
ttgagacggcatctgaactcacttgaggaacggctgctcgagagtatggtatgggagaaa
ggctcttcgatgtacaactctctgatcattgccaagccatcgcttgcacaggagattaat
cagctcagattactagctgaaccgatgccatctctggatgcaattgcagcgcttattaac
ttctctgaaggactaaatcatgcctcatctatccaaaagcatgaaacatgtccaggacaa
aatggggatattaaatcgcccaaaagacagtgtactgattaccacagcgttctagttgag
cgcaattcctttacatcaccagtaaaggatcgtctgttggcatctggcaacgttaaatcc
aagctgccaccacctccgttgcagtctgcatttgctagtcctacacggcccaacccagga
ggtggaggagaaacttgtgcagaaactgggatcaatatattcttcactaagattaataaa
ttggctgctgtcagaatcaacggaatggtggaaaggctacaactttctcagcaaataagg
gagagtgtatatcgtctcttccaacatgtacttactcagcagacttctcttttgtttaat
cgacacattgaccagatcattctctgttgcttttacggagtggccaagttatcccaaatg
aggctgactttcaaggaaatcgtattcaactatcggaagcaaccacagtgtaaaccacta
gtttttggcagcgtttatgtggattcttttcattgtcgccgtcaagggagagtagggcca
gatcatgttaacatcatcacattctacaacgacgtatttgttcctgccgcaaagacgctg
ctggtggagatagttcctgtgaaaaacgaccaggatgtggaggccaataataagcctgaa
ggtcattgtcctggatcctcgaaagtatcagtgtttcccagtgttccagacatgtcccct
aaaaaagtatctgctgtgcacaatgtttatgtttctcccctaagggcatcaaagatggat
gctcttatttcacacagctcaaggagttcatatgcttgcgttggagagagcacacgtgct
taccaaagcccttcaaaagacctatcagccatcaacaatcggttgaacaacagcagcaac
agaaaccgcaagaggacgcttaactttgacgtagagctggtcagcgattctatggtagca
aacagccttcccctccaaaaacaacaaaaccaaaatggaagcgatgcatctccctcaggt
ggtgcacccctcaaaaccgagccactacattcatag

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (5)   
   Pfam (5)   
All databases (22)   

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