KEGG   Brassica napus (rape): 106424236
Entry
106424236         CDS       T04128                                 
Name
(RefSeq) tRNA dimethylallyltransferase 2-like
  KO
K00791  tRNA dimethylallyltransferase [EC:2.5.1.75]
Organism
bna  Brassica napus (rape)
Pathway
bna00908  Zeatin biosynthesis
bna01100  Metabolic pathways
bna01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:bna00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00908 Zeatin biosynthesis
    106424236
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:bna01006]
    106424236
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bna03016]
    106424236
Enzymes [BR:bna01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.75  tRNA dimethylallyltransferase
     106424236
Prenyltransferases [BR:bna01006]
 Compound prenylation
  tRNA dimethylallyltransferase
   106424236
Transfer RNA biogenesis [BR:bna03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    106424236
 Prokaryotic type
    106424236
SSDB
Motif
Pfam: IPPT IPT SF3a60_Prp9_C nSTAND3 Cas9-BH AAA_33 Cytidylate_kin AAA_18 AAA_22 RNA_helicase PhoH Peptidase_M1 Adeno_IVa2 AAA_28 AAA IstB_IS21 ABC_tran ATPase_2 AAA_25 AAA_29 RsgA_GTPase
Other DBs
NCBI-GeneID: 106424236
NCBI-ProteinID: XP_013720440
Position
C4:52195030..52197503
AA seq 464 aa
MPVNPSNGGIEEEKMKKKAKVVVIMGPTGSGKSKLAVDLASHFPVEIINADAMQIYSGLD
VLTNKVTINEQKGVPHHLLGTVSPDMEFTAKDFRDSAIPLIEEIISRNHVPVLVGGTNYY
IQALVSKFLLEDSTEDSDECCSNVAPGLDVESISGRDDLSHGYDLLKELDPVAANRVHPN
NHRKINQYLSLHASRGVLPSKLHQENAAENWGCIDASSRFDYCLICMDAETTVLDEYVGQ
RVDSMVDAGLLDEVYDIYKPGADYTRGLRQSIGVREFEDFLKTYLPDTNSSANDKALKEN
LRKILDSPKDDKLRVMLEEAIDCVKLNTRRLLRRQKRRINRLETVFGWNIHHVDATECLL
SKSEDLWDAQVVKSAAEILQSFLETETELGHDSTLRKSVERDLWSQYVCEACGNKVLRGR
HEWDHHTQGRVHRKRTARFKKTQNFKNREKQQEEEEVGICRGTS
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgccggtaaaccctagcaacggcggaatcgaggaagagaagatgaagaagaaggcgaag
gtggtggtcataatggggcccacgggatcaggaaaatcgaagctagccgtagacttggcg
tctcacttcccggtggagatcataaacgccgacgcaatgcagatctacagtggcctcgac
gttctcacgaacaaagtcaccatcaacgagcagaaaggagtgcctcatcatctacttggg
acggtgagcccagatatggagttcactgctaaggactttcgagactccgccattcctctt
attgaagagatcatttctcgcaaccacgttcctgttcttgttggaggaactaattattat
atacaggctcttgtcagtaaatttcttcttgaggattcaacagaagacagtgatgagtgc
tgttcaaatgttgctccaggcttggatgtggagtctatctctgggagagatgatttgagc
catggctatgaccttcttaaagagcttgatcctgtggcagcaaacagagttcaccctaat
aatcacagaaaaattaatcaatacctgagcttgcatgctagcagaggagttcttccaagc
aagctacatcaggaaaacgctgcagagaactggggatgcatcgatgcctcctctcgattt
gactactgtttgatatgtatggacgctgaaaccacggtgctggacgaatacgttggacaa
agagtggattccatggtagatgccggactacttgacgaagtctatgacatctacaaacca
ggagctgactataccagaggcctaaggcagtctataggcgtcagagagtttgaagacttc
ctgaaaacgtatctcccagacacaaatagctccgctaatgataaggccttgaaggagaat
ctgaggaagattcttgattctccaaaagatgataagttgagggttatgctggaggaagca
attgattgtgtcaagctaaataccagaaggctcctacgtcgtcaaaaaaggagaatcaat
cggctagaaacggtctttggctggaatatccatcacgttgatgcaacagagtgcttacta
agcaaatcagaagatttatgggatgcgcaagtggttaaatcggctgcagagattctccag
tctttcctggaaacagaaactgagttgggtcatgattcaaccttaagaaagtcagtggaa
agagatctatggagtcaatacgtttgtgaggcttgtggaaataaggtactaagaggaaga
cacgagtgggatcatcacacacaaggtcgtgtacatcgtaagagaaccgcacgatttaaa
aaaactcaaaatttcaaaaacagagagaagcaacaagaagaagaagaagtggggatttgc
agagggacatcgtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (21)   
   Pfam (21)   
All databases (41)   

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